| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2117 |
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| Symbol | |
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| ID | 4076431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2223110 |
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| End bp | 2223844 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007436 |
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| Product | 20S proteasome, A and B subunits |
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| Protein accession | YP_614111 |
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| Protein GI | 99081957 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.434254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATATT GTGTGGGAAT GATGCTCGAT GCCGGGCTGG TTTTCATGTC CGACACCCGC
ACAAATGCAG GGCTAGACAA TATCTCAACC TTCAAGAAGA TGACCTCCTG GGAGGCCCCC
GGCGAGCGGG CCATCACCCT GCTGTCCTCG GGCAACCTTG CCACCACGCA GGCCGTTGTG
AGCCTTCTGG AGGAACGCCC TCACGCGCAC GGCGAACGCG ACCCGTCGAT CCTTGGCGTG
CCCTCGATGT TCCAGGCCGC TCGGTTGGTG GCGGATACGC TGCGCGAGGT GATCGCACAG
CATGATGCTG CGGGACAACA GGCCGACAGC GCCTTTGGGG CCACGTTGAT TCTGGGTGGT
CAGATCAAAG GCGGGCCGCC ACGCCTCTTC ATGATCTACC CCGAGGGCAA TTTTATCGAG
GCCAGCGCGG ATACGCCTTT CTTTCAGATC GGCGAAACAA AATACGGCCG CCCGATTCTG
GTCCGGGCGT ATGATCCGAA AATGTCCTTT GAAGCCGCGA TCAAGCTGCT CCTCGTGAGC
TTTGACTCCA CCGTCAAAGC CAACCTGTCG GTGGGAGCAC CGTTTGATTT TCACTTCTAT
CGCAAGGACT CGCTCCAGCT CGACACCACG GGGCGTATCG ATGCGGACAA TCCCTATCTG
CAGCTGATCT CTCAGGGCTG GGGCGATGCG CTGAAAAACG CGCTCGAGAG CCTGCCAGAC
TTCGCGCTCG AGTGA
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| Protein sequence | MTYCVGMMLD AGLVFMSDTR TNAGLDNIST FKKMTSWEAP GERAITLLSS GNLATTQAVV
SLLEERPHAH GERDPSILGV PSMFQAARLV ADTLREVIAQ HDAAGQQADS AFGATLILGG
QIKGGPPRLF MIYPEGNFIE ASADTPFFQI GETKYGRPIL VRAYDPKMSF EAAIKLLLVS
FDSTVKANLS VGAPFDFHFY RKDSLQLDTT GRIDADNPYL QLISQGWGDA LKNALESLPD
FALE
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