Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2096 |
Symbol | |
ID | 4077847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2202126 |
End bp | 2203304 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007415 |
Product | hypothetical protein |
Protein accession | YP_614090 |
Protein GI | 99081936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATC ACGAACGCGA AGGCCGGCCA CAGTTTTCAC AGCCGGTGCG TCAGGTTGTC ATGATGCTGA TTGCATTGGG ACTGGCGGGG GCGGGCGCTT TTATGGCGTT GCCGCGGGTG ATGCCGGTCT TTGAAGCCAA TCCCTATCTT AATGGCTTTA TCGCCTTTGT GTTCATCGTC GGGGTTTTGG CGACCTTCTG GCAGGTGATG CAGCTCATCA ACTCGGTGCG CTGGATTGAA CGCTTTGCCG CCGGGGTCAC CACCGACGAG GATCGCGCGC CCTCGATGCT GGCGCCACTG GCTGCGCTCT TGCGCTCTCG GGGCGCGCGG ATGCAGCTTG GCTCGGCCTC GACCCGCTCA ATTCTGGATT CCGTTGCAGA GCGCATCGAC GAAGAGCGCG AAATCACGCG ATATATCGTC AACCTTTTGA TTTTTCTTGG TCTTTTGGGG ACGTTTTACG GTCTGGCGAC CACGGTACCA GCTGTTGTCG ACACCATCCG CAGCCTTGCG CCCCAAGATG GCGAAGAGGG TGTCGCTATC TTTAACCGGC TGATGACGGG ACTTGAATCG CAGCTGGGCG GTATGGGCGT GGCCTTTGCC TCCTCGCTTT TGGGGCTGGC GGGATCGCTC ATCGTGGGCC TGCTCGAACT CTTTGCGGGT CATGGGCAGA ACCGCTTTTA CCGCGAACTC GAGGAATGGC TGTCGTCCTT CACCCGTGTG AGTTTTTCCT CGGGCGAGGA GGGCGGCACC GGCGACAGCA ACCTCGTGGC GGGCGTGCTT GATACGATGG CGGAGCAGAT GGACGCGCTT CAGGCGATGT TTGTGGAAAC CGCTAAGGGA CGCGCGGAGG TCGAAGGCAA GCTCTCGCGC CTGATCGACA CCATTGAGGA CATGAACCGC CGTCAGGATG ATGTGGCGTC GATCTCCGGT GCGCTCGAGC GTGTCGCGGT TGGTCAGGAG ACGCTCGCCG AACTGATGCG GGCCCATGGT GACGTTGGCA TCGACGCCGA GAGCCGCATG CGCCTGCGTT CGATCGACGT ACAAATGCTG CGCATCCTCG AGGAAATCTC CGCCGGACGG CAAGAGAGCC TCTCGGAGCT GCGCAAGGAC ATCGACCTGC TGGTCAAAGC TTTCGCAGGC CCGCGTGGCA TGGATCGCGC GGCGCGGAAA GAGAGCTAA
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Protein sequence | MAHHEREGRP QFSQPVRQVV MMLIALGLAG AGAFMALPRV MPVFEANPYL NGFIAFVFIV GVLATFWQVM QLINSVRWIE RFAAGVTTDE DRAPSMLAPL AALLRSRGAR MQLGSASTRS ILDSVAERID EEREITRYIV NLLIFLGLLG TFYGLATTVP AVVDTIRSLA PQDGEEGVAI FNRLMTGLES QLGGMGVAFA SSLLGLAGSL IVGLLELFAG HGQNRFYREL EEWLSSFTRV SFSSGEEGGT GDSNLVAGVL DTMAEQMDAL QAMFVETAKG RAEVEGKLSR LIDTIEDMNR RQDDVASISG ALERVAVGQE TLAELMRAHG DVGIDAESRM RLRSIDVQML RILEEISAGR QESLSELRKD IDLLVKAFAG PRGMDRAARK ES
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