| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2089 |
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| Symbol | |
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| ID | 4077840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2193128 |
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| End bp | 2193781 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007408 |
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| Product | ATP synthase F1, delta subunit |
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| Protein accession | YP_614083 |
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| Protein GI | 99081929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.449472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGGCC AAAATCGGGC GACCTCACGC CCCCGGATGC TACCTGCCAG GACGCATATA
AACCGGGGCC AAAATAATAT CGGAAGGGTG GACGTGTCCG AACCAGCTTC GATTTCCGCA
GGCATTGCCG ACCGCTATGC CACAGCGATC TTCGAGATCG CTGCCGAGAG CAATGCTCTC
GACAACCTCG AGACTAGCAT CAACGATCTG GCAGCCTCCC TGGCTGACAG CGAAGACCTG
CGTACTCTCA TCACCTCACC GCTGGTGTCG CGTGAGGAAC AGGCCGCTGC GATCTCTGCC
GTAGCGGACA AGATGGGGCT TGTAGATGTA CTGCGCAACT CCCTCGCGCT GATGGCGGCC
AAACGCCGCC TGTTTGTGGT GCCCGCCCTG ATCGACGCGC TGCGCGCCCG TATCGCAGAA
GCCCGTGGCG AAGTGACCGC CGAGGTCGTC TCCGCCAAGG CGCTGACCAA GACGCAGAGC
GAAAAACTGG CCAAAACCCT CGCCGAGCGC GTGGGCAAGA AGGTCACCAT CAATGCCACC
GTCGATGCAA GCATCATCGG CGGTCTCGTC GTTAAAGTGG GCTCGAAGAT GATCGACAGT
TCGATCCGCT CCAAGCTCAA CTCCCTACAG AATGCAATGA AAGAGGTCGG ATAA
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| Protein sequence | MPGQNRATSR PRMLPARTHI NRGQNNIGRV DVSEPASISA GIADRYATAI FEIAAESNAL
DNLETSINDL AASLADSEDL RTLITSPLVS REEQAAAISA VADKMGLVDV LRNSLALMAA
KRRLFVVPAL IDALRARIAE ARGEVTAEVV SAKALTKTQS EKLAKTLAER VGKKVTINAT
VDASIIGGLV VKVGSKMIDS SIRSKLNSLQ NAMKEVG
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