| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2088 |
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| Symbol | |
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| ID | 4077839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2191586 |
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| End bp | 2193127 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007407 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_614082 |
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| Protein GI | 99081928 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.509731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCC AAGCAGCGGA AATTTCCGCG ATCCTTAAAG ACCAGATCAA GAATTTTGGT
CAAGAAGCCG AAGTGGCCGA GATTGGTCGC GTGCTCTCCG TCGGTGACGG TATTGCCCGT
GTCTATGGCC TCGACAACGT CCAGGCGGGC GAAATGGTCG AATTCCCCGG CGGCATCATG
GGTATGGCGC TGAACCTGGA ATCCGACAAC GTCGGTGTGG TTATCTTCGG CTCCGACCGC
GACATTAAAG AAGGCGACAC CGTCAAGCGC ACCAACTCCA TCGTGGACGT GCCTGCTGGT
CCCGAGCTTC TGGGTCGCGT TGTCGACGGC CTCGGCAACC CGCTCGACGG CAAAGGCCCG
ATCGAAGCCA AAGAGCGCAA GGTTGCAGAC GTCAAAGCGC CGGGCATCAT CCCGCGTAAA
TCCGTGCACG AGCCGATGGC AACCGGCCTC AAGTCCGTGG ACGCGATGAT CCCCGTTGGC
CGTGGCCAGC GCGAGCTGAT CATTGGTGAC CGTCAGACCG GTAAGACCGC GATCGCTCTG
GACACCATCC TGAACCAGAA GTCCTACAAC GACGCTGCAG GCGACGACGA CTCCAAGAAA
CTCTACTGCG TCTACGTTGC TGTGGGTCAG AAGCGTTCCA CCGTGGCGCA GCTGGTGAAA
AAGCTCGAAG AGTCCGGCGC GATGGAATAC TCCATCGTTG TGGCCGCAAC CGCGTCCGAC
CCGGCACCGA TGCAGTTCCT TGCCCCCTAC GCGGCGACCG CGATGGCCGA ATACTTCCGC
GACAGCGGCA AGCACGCGCT CATCATCTAT GATGACCTCT CCAAGCAGGC TGTGGCCTAT
CGTCAGATGT CCCTGCTGCT GCGCCGCCCG CCGGGCCGTG AAGCTTATCC GGGTGACGTT
TTCTACCTCC ACTCCCGTCT GCTCGAGCGT TCCGCAAAGC TGAACGAAGA CTTCGGTGCA
GGCTCGCTGA CCGCGCTGCC GATCATCGAA ACCCAGGGCG GCGACGTGTC TGCGTTTATT
CCGACCAACG TGATCTCCAT CACCGACGGT CAGATCTTCC TTGAGACCGA ACTGTTCTAC
CAGGGCATCC GCCCCGCCGT GAACACCGGT CTGTCGGTTT CGCGTGTGGG CTCCTCGGCT
CAGACCGATG CGATGTCTTC CGTTGCGGGC CCTGTGAAAC TGTCCCTGGC TCAGTACCGC
GAAATGGCGG CCTTTGCGCA GTTCGGTTCC GACCTCGACG CCGCAACCCA GCAGCTGCTG
GCCCGTGGCG CGCGTCTCAC CGAGCTGATG AAACAGCCGC AGTATTCGCC GCTCACCAAC
TCTGAAATCG TCTGCATCAT CTTCGCGGGC ACCAACGGCT ACCTCGACAA AGTCGACGTC
AAGGAAGTGG GTCGTTATGA AGCCGAGCTT CTGACCTTCC TGCGCTCCAA GAAGGCCGAC
TTCCTGCAGT GGATCACCGA TGAGGATCCC AAGTTCAAGA AGGGTGAACC GGTCGAGAAG
ATGAAGGCTG TTCTGGACGA ATTCGCAGCA GACTTCGCGT AA
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| Protein sequence | MGIQAAEISA ILKDQIKNFG QEAEVAEIGR VLSVGDGIAR VYGLDNVQAG EMVEFPGGIM
GMALNLESDN VGVVIFGSDR DIKEGDTVKR TNSIVDVPAG PELLGRVVDG LGNPLDGKGP
IEAKERKVAD VKAPGIIPRK SVHEPMATGL KSVDAMIPVG RGQRELIIGD RQTGKTAIAL
DTILNQKSYN DAAGDDDSKK LYCVYVAVGQ KRSTVAQLVK KLEESGAMEY SIVVAATASD
PAPMQFLAPY AATAMAEYFR DSGKHALIIY DDLSKQAVAY RQMSLLLRRP PGREAYPGDV
FYLHSRLLER SAKLNEDFGA GSLTALPIIE TQGGDVSAFI PTNVISITDG QIFLETELFY
QGIRPAVNTG LSVSRVGSSA QTDAMSSVAG PVKLSLAQYR EMAAFAQFGS DLDAATQQLL
ARGARLTELM KQPQYSPLTN SEIVCIIFAG TNGYLDKVDV KEVGRYEAEL LTFLRSKKAD
FLQWITDEDP KFKKGEPVEK MKAVLDEFAA DFA
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