| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2086 |
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| Symbol | |
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| ID | 4077837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2189250 |
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| End bp | 2190674 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007405 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_614080 |
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| Protein GI | 99081926 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.531544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATG CAAAAGGCAA GGTGACTCAG ATCATCGGCG CCGTTGTGGA CGTCCAGTTC
GACGGCGAGC TGCCGGCGAT TTTGAACGCC CTCACCACCG ACAACAACGG CAAGAAACTC
GTTCTCGAGG TTGCTCAGCA CCTCGGCGAG AACTCTGTCC GTACCATCGC GATGGACGCG
ACCGAAGGTC TCGTGCGTGG TCAGGAAGTG ACCGACACCG GTGCTCCGAT CTCGATTCCG
GTCGGCAACG CAACCCTGGG CCGCATCCTG AACGTTGTGG GTGAGCCGGT TGACGAAGGC
GAGCCGATCG TTGCGAAAGA GACCCGCGCG ATCCACCAGC CCGCGCCCGA GTTCAACGAC
CAGTCCACCG AATCCGAGGT CCTCGTGACC GGCATCAAGG TGATCGACCT TCTCGCGCCT
TATGCGAAGG GTGGTAAGAT CGGTCTGTTC GGCGGCGCCG GCGTTGGTAA AACCGTTCTC
ATCATGGAAC TGATCAACAA CATCGCAAAA GTGCACTCGG GTTACTCCGT GTTCGCGGGT
GTTGGCGAAC GGACCCGTGA AGGCAACGAC CTTTACCACG AGATGATCGA ATCCAACGTG
ATTAAGCCCG ACAACCTCGA AGAGTCGCAG GTTGCTCTGG TTTACGGCCA GATGAACGAG
CCTCCGGGTG CGCGTGCCCG TGTTGCCCTG ACCGGTCTGA CCCTTGCAGA GCAGTTCCGT
GACCAGTCCG GTACCGACGT TCTGTTCTTC GTGGACAACA TCTTCCGCTT CACGCAGGCC
GGTTCCGAGG TGTCCGCACT TCTCGGCCGT ATCCCCTCCG CTGTGGGCTA CCAGCCGACG
CTGGCGACCG ACATGGGTGC GATGCAGGAG CGTATTACCT CCACCAAGAA CGGCTCGATC
ACCTCGATCC AGGCTGTGTA TGTTCCCGCG GACGACCTTA CCGACCCGGC ACCTGCAACA
ACCTTTGCCC ACTTGGACGC GACCACCGTT CTCAACCGTG CGATCTCCGA GCTCGGCATC
TACCCCGCTG TGGACCCGCT CGACTCCTCG TCGCGCCTGA TGGACCCGCA GATCGTTGGC
GAAGAGCACT ACAAAGTGGC CTCCGACGTT CAGCAGATCC TTCAGCGCTA CAAGTCGCTG
CAGGACATCA TCGCGATCCT CGGCATGGAC GAACTCTCCG AAGAGGATAA GCTGACCGTT
GCGCGTGCGC GTAAGATCCA GCGCTTCCTG TCGCAGCCGT TCGACGTTGC AAAAGTCTTC
ACCGGTTCCG ACGGTGTGCA GGTTTCCCTC GAGGACACCA TCGCGTCGTT CAAAGCCGTT
GTGGCTGGCG AATACGACCA CCTTCCCGAA GGCGCCTTCT ACATGGTTGG CGGCATCGAC
GAAGTGATCG CAAAAGCCGA GAAAATGGCT GCTGACGCGG CCTAA
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| Protein sequence | MANAKGKVTQ IIGAVVDVQF DGELPAILNA LTTDNNGKKL VLEVAQHLGE NSVRTIAMDA
TEGLVRGQEV TDTGAPISIP VGNATLGRIL NVVGEPVDEG EPIVAKETRA IHQPAPEFND
QSTESEVLVT GIKVIDLLAP YAKGGKIGLF GGAGVGKTVL IMELINNIAK VHSGYSVFAG
VGERTREGND LYHEMIESNV IKPDNLEESQ VALVYGQMNE PPGARARVAL TGLTLAEQFR
DQSGTDVLFF VDNIFRFTQA GSEVSALLGR IPSAVGYQPT LATDMGAMQE RITSTKNGSI
TSIQAVYVPA DDLTDPAPAT TFAHLDATTV LNRAISELGI YPAVDPLDSS SRLMDPQIVG
EEHYKVASDV QQILQRYKSL QDIIAILGMD ELSEEDKLTV ARARKIQRFL SQPFDVAKVF
TGSDGVQVSL EDTIASFKAV VAGEYDHLPE GAFYMVGGID EVIAKAEKMA ADAA
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