| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2069 |
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| Symbol | |
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| ID | 4077996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2172766 |
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| End bp | 2173767 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007388 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_614063 |
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| Protein GI | 99081909 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.828242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT CACTTTTGAC CACCGCAGCC ACGGCGGCTG CTTTCACCCT GTCGCTCGGC
GCTGCAGACG CGGCAGACAT GCGGCTCAAA CTCGCCGGGG TCGTCCCGGT CGAACACTTC
GGCAATGACA TTCTGAAGCA GATCGAAGCG GATATCGAAG GCGCTGATGT GGGCCTCTCG
GTGACCTTGT TTGAGGCGGG GCAGCTGGGC TCTGGCGAAG AGCTGTTCGA GGACGCCGCG
CGCGGCAACG TCGATCTGGT GCATTCCGTG ATCTACGCGC ATCGTGACCC GGTGCTGGAG
ATCAACTCCT TGCCTTATCT GGTGTCGAGC TTTGATGAGA TGGAAGACAT CTATCTCAAC
AAGGACAGCG CCTTTAACGA GATTTTTGCC GAGCGTCTGG AGGGGCTGGG GCTGAAACTT
CTGGCCAATG CACCCGAAGG TTTCATCGGC GTTGTGGCCG AGAACCTTCC TGAAAACGCC
ACCTCGGTCG GCGACAAGGA CGTCAATATT CGCGTCTGGT CGAGCCAGGT GATCAAAAAC
ACCGTCGAGG CCATGGGCTT TAACGCCACC ACGATGAACT GGGGTGAGGT TTTCCCCGCG
ATCCAGTCCG GCGTCGTGGA CGGGGCCATC TGCTGCACCG CGCAGCTGGC CTATAGCGCC
TTTGCCACCT CGGATGTGGG CAAGTATTTC ATCCCCTATG GCGCAGTGGT CGAGAACACG
ACCTATTACG CCTCCATGGA AACATGGGAA GAGATGAACG ACGAACAGCG CGCCGCCGTA
CAGGCCGCCT TCGACAAGGC CGCACAGACC TATTTTGCCG AGGCCAAGGC GAATGAGGCG
GGCTATATCG ATAAGCTTAA AGAGACCGGT TACGAGGTCG TTGAAGTTTC TGACGCCGAA
CGCAGCGCGA TTGCTGAAAC CGTGCGTAAG GACGTCTGGC CCGGCATTGC CGAGATCGTT
GGTCAGGACG TCATCGACCG CCTGATGACC GCCAAGAACT GA
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| Protein sequence | MRKSLLTTAA TAAAFTLSLG AADAADMRLK LAGVVPVEHF GNDILKQIEA DIEGADVGLS
VTLFEAGQLG SGEELFEDAA RGNVDLVHSV IYAHRDPVLE INSLPYLVSS FDEMEDIYLN
KDSAFNEIFA ERLEGLGLKL LANAPEGFIG VVAENLPENA TSVGDKDVNI RVWSSQVIKN
TVEAMGFNAT TMNWGEVFPA IQSGVVDGAI CCTAQLAYSA FATSDVGKYF IPYGAVVENT
TYYASMETWE EMNDEQRAAV QAAFDKAAQT YFAEAKANEA GYIDKLKETG YEVVEVSDAE
RSAIAETVRK DVWPGIAEIV GQDVIDRLMT AKN
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