| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2063 |
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| Symbol | |
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| ID | 4077990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2165626 |
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| End bp | 2168046 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007382 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_614057 |
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| Protein GI | 99081903 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACAG AAGCCAAGGC CGTGGTCATC GGCGGCGGGG TCATCGGTTG TTCGATCCTT
TATCACCTGA CCAAACTCGG CTGGTCCGAT GTGGTGTTGC TGGAGCGCGA CGAGCTGACC
TCGGGATCGA CCTGGCACGC GGCGGCCAAT ATCCATGGCC TGCACGACAG CACCAACATC
TCGCGCATCC AGCACTATAC GATGACGCTC TACAAGGAGC TCGAGCAGGA AACCGGCCAG
GGCTGCGGCG TGTTTCAGCC CGGATCTCTC TATCTGGCGC AGACCGAAGA CCGCGCGCAC
CAGCTGCGTC TGCAGGCCGC CAAGGCCAAG CTCTACGGGA TGAACTTCTA CGAGATTTCC
ATCGAGGAAG CTCAGGAACT CAACCCGCTG GTGAATTTCG ACGGGATCCG CTGTGTCATG
TATGAGCCCG ATGGCGGCAA TGTGGACCCC TCCGGTGTGA CACAAGCCTA CGCCACCGGC
GCGCGGCAAC GCGGCGCCGA GATCCATCGT TTCACGCCGG TCACGGCCAC AGAGGCGCAG
CCTGATGGCA CCTGGATTGT AAAAACCCCC AAGGGCGACA TTCACACCGA CTGGGTGGTG
AATGCAGCGG GTCTTTGGGG CCGGGAGGTG GCAAAACTTG CGGGCCTCGA GTTGCCTCTG
CAACCCACCG AGCATCAGTA TTTTGTCACC GAAACGATTC CGGAGATCGC CGGAATGGAG
CGTCGCCTGC CATCTGTATC GGATCGCGAC GGGGAATATT ACCTGCGCCA AGAGGGACAG
GGGCTTCTGG TGGGTGCCTA TGAGAAGGGC ATGAAATTCT GGGCCGAGGA CGGCACGCCC
CTGGATTTTG CGCATGACCT GTTCCCCGAC GACCTCGAGC GCATCGAAGA AAACATGATG
AACGCCATCG AACGTGTGCC TGTGGTGGGG GATGCGGGCA TCAAGCGCGT GATCAACGGA
CCAATGATCT GGTCACCCGA TGCCAATGTG TTGTTTGGCC CGGTGCCGGA GCTTTCGGGC
TATTTCTGCT GCAATGGCAT CATCCCCGGC TTTTCGCAGT CCGGCGGTAT GGGCCTGATG
GCGGCGCAGT GGATGATCGA GGGCGAGACG CAGTTTGACA TGTTCAACTG GGACGTGGCG
CGGTTTGGCG ACTGGGCCAC AAAGGAATTC ACCAAGGCGC GCGTAGAGGA TCAATATGCG
CATCGGTTTG CGATCCATTT CCCAAATGAA GAGCGCAGCG CAGGCCGCCC CGCCCGCACC
CGCCCGATCT ATGAGATGCA GCGCGAGATG GGCGCGGTCT TTGGGCTCAA TGCCGGATGG
GAGCACCCCT TGTGGTTTGC GGATCAGCCC GGCGCCGAGG ACACCAATGG CTTTACCCGG
CAGAACTGGT GGGGGCCGGT GGGCGAAGAA TGCAAGATGC TGCGCGCGCG TGCCGGCATC
ATCGACATAT CGAATTTCGC CAAATACCGC TGCAAAGGCC CTGATGCCGA GGACTGGCTG
AATGCGGTAT TTGCCAATCG CATGCCAAAG GCGGTGGGGC GGTCGTGCCT CACGCCCTTG
ATTTCAAAGC GCGGCGGGAT CGCCGGGGAT TTCACCGTCA CACGGCTGGC GGAGGATGAA
TTCTGGGTCA TCGGCTCCGG CATGGCGGAG CGCTATCACA AGCGGTTCTT TGGTGCGGTG
CCCTTGCCGG AAGGGACCTC GTTTGAGAGC CTCACCCAGG AGGTCTGCGG TTTCAACGTG
GCAGGCCCCA AGTCGCGCGA GATGCTCCAG CGCATGACCA ATGAGCCTTT GGACACCGCC
TCATTCCCCT TCATGCGCAG CAAACGACTG ATGCTCGCAG GGATCAATGT TGTGGCGTTG
CGCGTCTCTT TCACGGGGGA CCTCGGCTGG GAGTTGCACT GCGCCACAGA GGATCAGGAA
AAGCTTTATA TCGCGTTGAT CGAAGCAGGC CGAGAGTTCG GCGCCGGCCC CGTGGGCAGT
CGCGCCCTGA TGTCGCTGCG CGTCGAGAAG GGCTATGGCT CCTGGAGCCG CGAGTACAGC
CCCGAGTACT TCCCGCATGA GGTGGGATTT CAGCCGCTGT GTAAAATGGA CAAGGATTTC
CTCAACAAAT CTGCCGCCGA GACCGCGATG GGCACGCCTG CGCGCGAGGA ATTGGTGCTG
CTGCATCTCA CTGCCGAGGA TGTGGAGGCC TCTGACGCCG ATGCCACCGG GGGGGAGCCG
ATTTTCAAGG ACGGACGCGG TATCGGGCGG GTAACATCGG GCACCTATGG ATACACGGTC
GGCATGTCTC TGGCTCTTGG CTATGTCAAA GACGCCAAGC CCGGTGATAC CGTCGAGGTG
ATGGTGCTGG GGCGCGCGCA CCGTGCCGTG ATCCTCGCCG AGCCGCCCTT TGACCCCAAG
GGCGAGCGGC TGCGCGCCTA G
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| Protein sequence | MRTEAKAVVI GGGVIGCSIL YHLTKLGWSD VVLLERDELT SGSTWHAAAN IHGLHDSTNI
SRIQHYTMTL YKELEQETGQ GCGVFQPGSL YLAQTEDRAH QLRLQAAKAK LYGMNFYEIS
IEEAQELNPL VNFDGIRCVM YEPDGGNVDP SGVTQAYATG ARQRGAEIHR FTPVTATEAQ
PDGTWIVKTP KGDIHTDWVV NAAGLWGREV AKLAGLELPL QPTEHQYFVT ETIPEIAGME
RRLPSVSDRD GEYYLRQEGQ GLLVGAYEKG MKFWAEDGTP LDFAHDLFPD DLERIEENMM
NAIERVPVVG DAGIKRVING PMIWSPDANV LFGPVPELSG YFCCNGIIPG FSQSGGMGLM
AAQWMIEGET QFDMFNWDVA RFGDWATKEF TKARVEDQYA HRFAIHFPNE ERSAGRPART
RPIYEMQREM GAVFGLNAGW EHPLWFADQP GAEDTNGFTR QNWWGPVGEE CKMLRARAGI
IDISNFAKYR CKGPDAEDWL NAVFANRMPK AVGRSCLTPL ISKRGGIAGD FTVTRLAEDE
FWVIGSGMAE RYHKRFFGAV PLPEGTSFES LTQEVCGFNV AGPKSREMLQ RMTNEPLDTA
SFPFMRSKRL MLAGINVVAL RVSFTGDLGW ELHCATEDQE KLYIALIEAG REFGAGPVGS
RALMSLRVEK GYGSWSREYS PEYFPHEVGF QPLCKMDKDF LNKSAAETAM GTPAREELVL
LHLTAEDVEA SDADATGGEP IFKDGRGIGR VTSGTYGYTV GMSLALGYVK DAKPGDTVEV
MVLGRAHRAV ILAEPPFDPK GERLRA
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