| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2058 |
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| Symbol | |
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| ID | 4077985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2161695 |
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| End bp | 2162609 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007377 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614052 |
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| Protein GI | 99081898 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCC GCCACTACAA TCTGCCCCCC CTGACCACGC TCACCGCCTT TGAAGCGGCG
GCGCGCCACC TCAGCTTCAA GGACGCCGCC AAGGAGCTCT CGGTGACACC GGGCGCGGTC
AGCCACCAAG TCAAAGCGCT GGAGGGGGAA TTGGGCGTGG CGCTGTTTCG CCGCAAGCAT
CGCGGCGTGG ATCTGACGGT GCCGGGGCAG ACCCTCTACG ACACGCTGGC GGGGTCCCTG
ACCCGCATCT CACAAAGCCT GCAGTCCATC CGCGACCAGA GCAGCGCAGG CGTGGTGACG
GTGGGCTCCA CCACGGCGAT GGCGGCCATG TGGCTATCGC CTGCCGTGAT CCGGTTCTGG
CGCGACCACC CGGAGATCAA CATCAACCAG GTGGTGCGCG ACCGGGCTTT CACCACCTCG
GCAGAACTTG ATCTCTATAT CTGGTATGGC CGCGAAAAGG ATCAGCGGCT GGATCAGTTT
CCGCTCTATC GCGATCGCCT GCTGCCTGTT GCCGCCCCGG AGCGGGCCGC CGAGTTGGCA
GGCGCGGATC TGGACGTGCT GGCCAGCCAG CGCCTGATCC ATCTGGAGGG CGACGACATC
AGTTGGACCA AATGGCACGA CTGGTTCCGC CAGCTTGGCT ACAGCGGTCC GGTGGCTTCG
GGCATCCGGG TCAACAACTA CTCTATCGCG CTGCAGGCGG CGCGCGATGG CGCCGGGCTG
ACGCTGGGTT GGGAGCGGCT GATCTCGCCG CTCATCACAC AGGGCGACCT AGCGATCATC
GGCCCGCATG TCCTGCCCGC ACCAGAGCGG TTTTTCCTCG TCAGCAAACC CGACGAGGAG
CTGACGCCCA GCGCCAGATT GCTGCGCGAC TGGATCATCG AAGAGGCCAG CCAGATCACG
GATGAGCCCT GCTAA
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| Protein sequence | MSRRHYNLPP LTTLTAFEAA ARHLSFKDAA KELSVTPGAV SHQVKALEGE LGVALFRRKH
RGVDLTVPGQ TLYDTLAGSL TRISQSLQSI RDQSSAGVVT VGSTTAMAAM WLSPAVIRFW
RDHPEININQ VVRDRAFTTS AELDLYIWYG REKDQRLDQF PLYRDRLLPV AAPERAAELA
GADLDVLASQ RLIHLEGDDI SWTKWHDWFR QLGYSGPVAS GIRVNNYSIA LQAARDGAGL
TLGWERLISP LITQGDLAII GPHVLPAPER FFLVSKPDEE LTPSARLLRD WIIEEASQIT
DEPC
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