Gene TM1040_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2052 
Symbol 
ID4077979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2155337 
End bp2155801 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID638007371 
ProductCoA-binding 
Protein accessionYP_614046 
Protein GI99081892 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCGG ATACGCTTCT CAAAGACGTT CTTCGTCGCA CGCACAGCAT CGCCGTGGTT 
GGGGTTTCAA CCAACCCGGT GCGCCCCAGT TACTATGTCG CCAGATACCT GTCCCTCAAG
GGGTATCGGG TCATCCCCGT CAATCCGGGC CACGCGGGCA AGGAGCTCTT TGGCGAGACG
ATCCGCGCCA CCCTGTCAGA CATTGATGCC CCCGTCGACA TGGTCGACAT CTTCCGCCGT
CCCGAAGCGG TGCCGGAGAT TGTGGACGAG GCGCTGGCGG TGTTTCCCGC GCTCCAGACG
ATCTGGATGC AGATCGGGGT GGAACACGCA GAGGCCGCCG CAAAAGCCGA GGCGCGCGGC
CTCACCGTGA TCCAGAACCG ATGCCCAAAA ATCGAGTATC AGCGCCTCTT TGGTGAACTG
CGTCAGGGTG GTTTTGCCAC CGGGATCATT TCATCGAAAC TGTGA
 
Protein sequence
MYSDTLLKDV LRRTHSIAVV GVSTNPVRPS YYVARYLSLK GYRVIPVNPG HAGKELFGET 
IRATLSDIDA PVDMVDIFRR PEAVPEIVDE ALAVFPALQT IWMQIGVEHA EAAAKAEARG
LTVIQNRCPK IEYQRLFGEL RQGGFATGII SSKL