Gene TM1040_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2040 
Symbol 
ID4077967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2147329 
End bp2147820 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID638007358 
Producthypothetical protein 
Protein accessionYP_614034 
Protein GI99081880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAT CTTCCCCCCA GTCCAAAGTC ATATCCTGCC CGTTGCCCAA GACCTCGACC 
CTATGGCAGC GGGTGCAGCC TCAGGATTTT ATCGATGGCT ATGCCGTCGA AAGCGCTCTT
TCCCCTCGGG AGGCAATGGA AATTGGCCTC AGCATGCCCG GCTGGGCCAG CGCGCTTTTG
GCCCTGCGCA ATCGTCTTGT TGCGCCCTTG GGGCTCAAGA CCGAGGCCAG CGATACCGGC
GAAGGGGCCA TTTTCCCGGT CACGCATGAA GACGAGAGCG AGATCATCCT TGGGACAGAC
GACAGCCACC TCGACTTTCG CATCTGCATC CGTCGCGAGG CCGGACGCAT CCATATGGCG
ACCTGGGTAC ATCGCAACAA TCTCTTGGGG AGAGCCTATC TTGTGGCAGT GATGCCGTTT
CACATTCTGA TTGTGCGCGA CTCCATGCGC CGGATCGCCC GCGCCAGCGC GCCGCTTGCT
CCTGTCAGCT AG
 
Protein sequence
MPQSSPQSKV ISCPLPKTST LWQRVQPQDF IDGYAVESAL SPREAMEIGL SMPGWASALL 
ALRNRLVAPL GLKTEASDTG EGAIFPVTHE DESEIILGTD DSHLDFRICI RREAGRIHMA
TWVHRNNLLG RAYLVAVMPF HILIVRDSMR RIARASAPLA PVS