| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2039 |
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| Symbol | |
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| ID | 4077966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2146291 |
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| End bp | 2147013 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007357 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_614033 |
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| Protein GI | 99081879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCT ACCCTGCCAT TGACCTCAAG GACGGCCAGG CCGTGCGACT TCTGCATGGT
GACATGGACA AGACCACCGT ATTCAACGAC AACCCCGCCG CGCAGGCGCT GGAGTTTGTG
GCGGCGGGCT GCGAATGGCT GCATCTGGTG GATCTCAACG GAGCCTTTGC GGGCGAGCCT
GTAAATGCGG CCCCCGTTGA GGAGATCCTG AGGCAATGCA AGGTGCCCGC GCAGCTGGGT
GGTGGCATTC GGGACATGGC TACGATCGAG CGCTGGCTCG ACAAGGGGCT GGCGCGGGTC
ATCCTTGGCA CCGTGGCGGT GGAAAACCCC GACCTCGTGC GCGAGGCAGC ACGCGCCTTT
CCGGGCAAGG TCGCCGTAGG GATTGATGCC CGCAATGGCA AGGTCGCAAC CAAGGGCTGG
GCCGAGGAAA CCGATGTCGA GGTGACCGAT CTGGCGAAAT CCTTCGAGGA CGCGGGCGTT
GCAGCCATCA TCTACACCGA CATCATGCGC GACGGTGCCA TGAAGGGGCC CAATATCGAC
GCGACAGCAG CGCTGGCCAA TGCGGTCTCT ATCCCGGTGA TTGCGTCGGG CGGGGTGTCA
TCCCTTGAAG ATCTGCATGC ACTCAAGTCC TGCGGTGCGG CGCTCAACGG CGCGATCTCT
GGTCGGGCGC TTTATGATGG TGCGATTGAT CTCGCCGAGG CGCTGGCCGT CCTGAAGGGC
TAA
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| Protein sequence | MILYPAIDLK DGQAVRLLHG DMDKTTVFND NPAAQALEFV AAGCEWLHLV DLNGAFAGEP
VNAAPVEEIL RQCKVPAQLG GGIRDMATIE RWLDKGLARV ILGTVAVENP DLVREAARAF
PGKVAVGIDA RNGKVATKGW AEETDVEVTD LAKSFEDAGV AAIIYTDIMR DGAMKGPNID
ATAALANAVS IPVIASGGVS SLEDLHALKS CGAALNGAIS GRALYDGAID LAEALAVLKG
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