| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2024 |
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| Symbol | |
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| ID | 4077481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2128764 |
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| End bp | 2131208 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007339 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_614018 |
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| Protein GI | 99081864 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.260389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.212402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT TTGACGAAAT GGACGCCTTT GAGGGCGCAT CATTGTCCGC CCGCGCCATG
GCCGCGCGTC CCATGCCCTA TCTGGATGGT CTCAATCCGG CCCAACGCGA CGCGGTGGAG
ACGCTGGATG GGCCGGTGTT GATGCTGGCG GGCGCGGGCA CCGGCAAGAC AAAGGCGCTG
ACCACCCGGA TCGTGCATCT GTTGAACACG AACAAGGCGC GCACCAACGA GATCCTCGCC
GTGACCTTTA CCAACAAGGC CGCGCGCGAA ATGAAAGACC GCGTGGGCCG GATGCTCGGT
CAGCCTGCCG AGGGCATGCC GTGGCTCGGC ACCTTTCACT CGATCTGCGT GAAGCTCCTG
CGCCGACATG CGGAACTGGT GGGGTTGAAG TCCAACTTCA CCATTCTGGA CACCGACGAT
CAGATCCGCC TGCTGAAACA GCTCATCCAG GCGGCGGGCA TCGACGACAA GCGCTGGCCC
GCGCGGATGC TGGCAAACAT CATCGACGAC TGGAAAAACC GCGCTCTGAC GCCTGCCAAG
GTGCCTGCGG GGGATGCGGC GGCCTATAAC CATCGCGGCA CCGAGTTCTA CGACCAGTAT
CAGACCCGCC TCAAGGAGCT GAACGCGGTT GATTTTGGCG ATCTGCTGCT GCACTGCGTC
GAGATTTTTC AGAACAACCC GGACCTCCTG GCGCAATATC ACCGCTGGTT CCGCTACATC
CTCGTGGACG AGTATCAGGA TACCAACGTC GCCCAATATC TCTGGTTGCG GCTCTTGGCG
TCGGGGCACA AGAACATCTG CTGCGTGGGC GACGATGACC AGTCGATCTA TGGCTGGCGC
GGCGCCGAGG TGGGCAACAT CCTGCGGTTT GAAAAGGATT TTTCCGGCGC CAAGGTGATC
CGGCTGGAGC AGAATTACCG CTCCACCAAA CACATTCTTT CGGCAGCCTC CGGTGTCATC
CGGGGCAACG AAGGGCGGTT GGGCAAGGAG CTCTGGACCG AGGCCGAGGG TGGCGAAAAA
GTCCGCCTCA TTGGCCATTG GGACGGTGAG GAAGAGGCCC GCTGGATCGG CGAGGAAATC
GAGGCGATGC AGCGTGGCAC CCGGGGGATG CGCCAGTATG GCCTCAATGA AATGGCGATT
CTCGTGCGTG CCTCGCACCA GATGCGCGCC TTTGAGGACC GGTTCCTGAC CATCGGTCTG
CCGTATCGTG TCATCGGCGG TCCGCGCTTT TACGAGCGGT TGGAAATCCG CGATGCCATG
GCCTATTTCC GCGTGGTGAT CTCGCCCGAA GATGATCTGG CCTTTGAGCG CATCGTCAAC
ACGCCCAAAC GCGGCCTTGG CGACAAGGCC CAGCAGACCA TTCAAACGGT GGCGCGCGCC
AATGGCGTCT CTCTCCTTGA GGGCGCGCGG CTTGCGGTCG AGGATGGCCT CATCAAGGGC
AAGGGCGGGG CCGCCTTGCG CCGTCTCGTT GAAAACATCG CCCGTTGGGG CCAGATGACC
CGCACCGTGC TGGCCGACCC GGACGATCCG GACGCGGTGG TCGAGGGCGT GCAGAGCTTT
GAGGCGTTTC AGGCCCGTAC AGAGGTCTCG CATGTGGAGC TTGCGGAGAT CATCCTGGAT
GAGAGCGGCT ATACCTCCAT GTGGCAGGCG GACAAGAACC CCGACAGCCC CGGCCGGCTC
GAGAACCTCA AGGAACTGGT GAAGGCGCTG GAAAACTTCG ATAATCTCCA GGGGTTTCTC
GAACACGTCA GCCTTGTGAT GGACAATGAC AAGCAAGACG CCGAGCAAAA AGTATCGATC
ATGACGCTGC ATGCCGCCAA AGGGCTGGAG TTCCCGGCGG TGTTCCTGCC GGGGTGGGAG
GATGGGCTCT TTCCCTCGCA GCGCTCGATG GATGAAAGCG GCCTTAAGGG CCTCGAGGAA
GAACGCCGTC TGGCCTATGT GGGCATCACC CGCGCCGAGA AGGTCTGCAC GATTTCCTTT
GCGGGCAACC GGCGGGTCTT TGGCCAGTGG CAGTCGCAAC TGCCTTCGCG CTTTATTGAC
GAGCTGCCCG AAGAGCATGT GGATGTGCTG ACCCCTCCCG GCCTCTATGG TGGCGGGTTT
GGGGCCGCTG CGCCTTCGGC CTCTGCGGTT GCCGAGCCAG CGGTGCGTTC CACCATCGAG
GAGCGGATGA GCAACGCCGA TGGCTATAAC TCGCCCGGCT GGAAACGGAT GCAGGCCCGC
ACGGCGGAAC GTGGCTACAG CAAACCGCGC AAGAGCGAGG CGCAGACCAT CGACCTGGCG
GCGACCTCCA GCTTTACGGT TGGGGAGCGG GTGTTTCACC AGAAATTCGG CTATGGTGCC
GTGGTCGGGA TCGAGGGCGA CAAGCTCGAG GTGGATTTTG AAAAAGCCGG CCCCAAGAAG
GTGGTGGCGC GCTTTGTTTC CGCCAGCGAT GACATCCCGT TCTAA
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| Protein sequence | MSTFDEMDAF EGASLSARAM AARPMPYLDG LNPAQRDAVE TLDGPVLMLA GAGTGKTKAL
TTRIVHLLNT NKARTNEILA VTFTNKAARE MKDRVGRMLG QPAEGMPWLG TFHSICVKLL
RRHAELVGLK SNFTILDTDD QIRLLKQLIQ AAGIDDKRWP ARMLANIIDD WKNRALTPAK
VPAGDAAAYN HRGTEFYDQY QTRLKELNAV DFGDLLLHCV EIFQNNPDLL AQYHRWFRYI
LVDEYQDTNV AQYLWLRLLA SGHKNICCVG DDDQSIYGWR GAEVGNILRF EKDFSGAKVI
RLEQNYRSTK HILSAASGVI RGNEGRLGKE LWTEAEGGEK VRLIGHWDGE EEARWIGEEI
EAMQRGTRGM RQYGLNEMAI LVRASHQMRA FEDRFLTIGL PYRVIGGPRF YERLEIRDAM
AYFRVVISPE DDLAFERIVN TPKRGLGDKA QQTIQTVARA NGVSLLEGAR LAVEDGLIKG
KGGAALRRLV ENIARWGQMT RTVLADPDDP DAVVEGVQSF EAFQARTEVS HVELAEIILD
ESGYTSMWQA DKNPDSPGRL ENLKELVKAL ENFDNLQGFL EHVSLVMDND KQDAEQKVSI
MTLHAAKGLE FPAVFLPGWE DGLFPSQRSM DESGLKGLEE ERRLAYVGIT RAEKVCTISF
AGNRRVFGQW QSQLPSRFID ELPEEHVDVL TPPGLYGGGF GAAAPSASAV AEPAVRSTIE
ERMSNADGYN SPGWKRMQAR TAERGYSKPR KSEAQTIDLA ATSSFTVGER VFHQKFGYGA
VVGIEGDKLE VDFEKAGPKK VVARFVSASD DIPF
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