Gene TM1040_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2020 
SymbolmraY 
ID4077477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2124111 
End bp2125193 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID638007335 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_614014 
Protein GI99081860 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.614618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.792385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTATT GGTTGACCGC ACTGTCGGAC GGGGGAGATT TCTTCAACCT CTTCCGCTAT 
ATCACCTTCC GCGCAGGCGG GGCCTTTCTG ACGGCTCTGA TCTTTGGCTT TGTATTTGGC
AAACCGCTGA TCAACGTGCT GCGCAAACGC CAGGGCAAGG GCCAGCCGAT CCGCGACGAT
GGCCCCGAGG CGCATCTCGC GAAGGTCGGC ACCCCCACCA TGGGGGGCCT GTTGATCGTC
GGGGCGCTGC TGTTTTCCAC CCTCATGTGG GCGCGCTGGG ACAATCCGTT TGTCTGGCTA
GTGCTGTTTG TGACCATGTC CTTTGGGCTC ATCGGGTTTG CCGATGACTA TGCCAAGGTC
TCCAAACAGA ACACCAGTGG GGTGTCGGGC AAGGTGCGGC TGCTTTTGGG GTTTGTGATC
GCCATCGTGG CCGCGCTCTG GGCGAGCTGG AACCACCCGG CTGAGCTGCA GAACCAGCTG
GCGATGCCGG TCTTTAAGGA CGTTCTGCTG AACCTCGGCT ATCTGTATGT GCCCTTCTGC
ATCTGCGTGA TCGTGGGGGC CGCCAATGCG GTGAACCTCA CAGATGGGCT CGATGGGCTT
GCGATCATGC CGGTGATGAT CGCGGCAGGC ACGCTTGGGA TCATCGCCTA TGCGGTGGGG
CGTGTGGATT TCTCGGAATA TCTCGATGTG CATTACGTGC CGGGGACAGG CGAGATCCTG
ATCTTCACCT CGGCGCTCTT TGGCGGGGGT CTTGGCTTCC TGTGGTACAA CGCCCCGCCC
GCTGCGGTGT TCATGGGCGA CACCGGCTCG CTGGCGCTTG GTGGTGCCTT GGGGGCCATT
GCGATCTCGA CCAAACACGA ACTGGTGCTG GCCATCGTCG GCGGGCTCTT TGTGGTCGAA
GCGCTATCGG TCATTATTCA GGTGCTCTAC TTCAAGCGCA CCGGCCGGCG GGTGTTTCTG
ATGGCCCCGA TCCATCACCA CTACGAGAAA AAAGGCTGGG CAGAGCCGAC CATCGTGATC
CGCTTCTGGA TCATCTCGCT GATCCTCGCG ATGATCGGCC TGGCAACACT GAAGGTGCGC
TAA
 
Protein sequence
MLYWLTALSD GGDFFNLFRY ITFRAGGAFL TALIFGFVFG KPLINVLRKR QGKGQPIRDD 
GPEAHLAKVG TPTMGGLLIV GALLFSTLMW ARWDNPFVWL VLFVTMSFGL IGFADDYAKV
SKQNTSGVSG KVRLLLGFVI AIVAALWASW NHPAELQNQL AMPVFKDVLL NLGYLYVPFC
ICVIVGAANA VNLTDGLDGL AIMPVMIAAG TLGIIAYAVG RVDFSEYLDV HYVPGTGEIL
IFTSALFGGG LGFLWYNAPP AAVFMGDTGS LALGGALGAI AISTKHELVL AIVGGLFVVE
ALSVIIQVLY FKRTGRRVFL MAPIHHHYEK KGWAEPTIVI RFWIISLILA MIGLATLKVR