| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2006 |
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| Symbol | |
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| ID | 4077463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2111425 |
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| End bp | 2112573 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007321 |
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| Product | gamma-butyrobetaine,2-oxoglutarate dioxygenase |
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| Protein accession | YP_614000 |
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| Protein GI | 99081846 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.949377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATC TCAGCTCTCC CCCCACGGTT GCGACCATTG CGGGCCTTGG TGACAAAGGT
CTCGATATTA CCCTGGCCGA CGGCGCGACC CATTATTTCA ATTACTACTG GCTGCGCGAC
AACTGCCCCA GCTCCTTTAG CGCCATGACC CGCGAGCGCA GCTTTGACAT CTTTCATCTG
GAGACCGCCC CACGCGCAAG AACGGCCGAG ATTGACGGGG ACGCGCTGGT GATCGACTGG
CAGGACGAAG ACCACATCAC CCGCATGCCG CTCTCTTGGC TCAATGCCTA TGCGGGTGGG
CAGCGCCGCC CCGACCCAGC CGATCTGTCG CGCGTGGCCT GGTTTGGCGA TCACTACCCA
TCGGTGCCGC GGTTCTCGCA GCCCGATCTG GTCTCGGATG ACGCGACCCG CGCCAAATGG
ATCGAGGCGA TGCTGGTGCA TGGTTTCACG ATCGTGACCG ACATGCCCGA CAGCGATGCG
GCGCTCACCC AGACGGCAGA GCTCATGGGC TTTGTGCGGC CCACCTTCTT TGGCACCTAT
TTTGATGTCA AAACCCACAT CAACCCCACC AATACCGCCT ATACTGCGGG CGCACTAGAG
CTGCACACCG ACACCCCGGC CGAGGAATTT GCGCCGGGTA TCCAGTTCCT CCATTGCCGC
ATCAACACGG TTGACGGTGG CGAGAGCCTC TATGCCGATG GGGTGGCGGT GGCCAATGAC
TTTCGCAAGC GCGACCCAGA GGGCTTCAGG CTTCTCAGCG AAGTGCCGAT CCCGTTTTAC
TGCGAACACG ACACTTATGA TGCGCGCTCG CGCCAATATG TGATCGAGCT GGATCAACAC
GGCGAAGTCG AGGGGCTCAC GATCAGTCAG CATATGGCCG ATATTTTCGA CCTCGATCAG
AAACTGCTCG ATGACTACTA CCCCGCGTTC TGCCGCTTTG GTCGGATGCT GCAGGAAGAG
AAATACATGA TGCGCTTTTT GATGAAGGGC GGTGAATGCA TGGTCTTTGA CAACCATCGC
ATCGTGCATG GCCGCGCCGC CTATACCGCC TCCAGTGGTG ACCGGTATCT GCGCGGCTGC
TACGTGGATC GCTCCGAGAT GCGCTCCACC TATCGTGCAT TGGTCAGCGA AGGACGGTTC
AAGGCATGA
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| Protein sequence | MNDLSSPPTV ATIAGLGDKG LDITLADGAT HYFNYYWLRD NCPSSFSAMT RERSFDIFHL
ETAPRARTAE IDGDALVIDW QDEDHITRMP LSWLNAYAGG QRRPDPADLS RVAWFGDHYP
SVPRFSQPDL VSDDATRAKW IEAMLVHGFT IVTDMPDSDA ALTQTAELMG FVRPTFFGTY
FDVKTHINPT NTAYTAGALE LHTDTPAEEF APGIQFLHCR INTVDGGESL YADGVAVAND
FRKRDPEGFR LLSEVPIPFY CEHDTYDARS RQYVIELDQH GEVEGLTISQ HMADIFDLDQ
KLLDDYYPAF CRFGRMLQEE KYMMRFLMKG GECMVFDNHR IVHGRAAYTA SSGDRYLRGC
YVDRSEMRST YRALVSEGRF KA
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