| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2005 |
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| Symbol | |
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| ID | 4077462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2110423 |
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| End bp | 2111313 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007320 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613999 |
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| Protein GI | 99081845 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATC TACCCCCTTT GCGCCTGCTT GTGACCTTTG AGGCGATCTC GCGTCACGGG
TCGATGCGCG ATGCTGCGCA GCGGCTCAAT GTGACCCAAC CGGCGGTCAG TCAGGCGCTC
AAGGCGCTGG AGGATCACGT GGGCGTGGCG CTCTTTGATC GCAGTGTGCG CCCGGCGCGT
CTGACCGACG CCGGAGAGAT GCTCTCGCGG GCGGTACGCG AGGGGCTTGG CCGGATTGCG
GCCACGCTCG AAGACATCCG TGCCCTGCAT GCCATTGGCG AACGGCAGGT AACGGTTTCA
TGCACATTGG GCATGGCGAC CTATTGGTTG ATGCCGAAAT TGCCAATGTT TTATGCGGAC
TACCCGGAGC TTACGGTCAA CGTGCAAGCC CCGGCAACCG ATCTTCCGGT GCTGAGCCCA
GGGATAGATG TGGCGCTTCG CTATGGCCGG GGCGGCTGGC GCGAAGGGCG CACGGAGAAG
CTCTTTGCTG AGGTGATCTG CCCGGTTGGC GCGCCGGCAC TGGTGGAGCG CCTTCTTGCG
GAGGGCGCCA CATTGGCTGA GGCGCCGTTG ATCCATGTGC GCAATCCGCA CAATGACCAC
TGGGCGGGTT GGGAAGATTA TCTTCAGGCT CGCGGTATTC AGCGTCCGCG CGGGGGCGGA
CAGATCTTTA ACAATTACGT CCAGGCGGCG CAGGCGATCT ATGATGGGCG CGGGCTTATG
CTGGGCTGGC GCTCGATCAC CGGTCAGGCG GAACGCGACG GCGCCCTCCG GGCCTGGCCC
GATGGCGCGC TGGATCTCGG GACGAGCTAT TTTGTCACCA TGCCCACGAC GCCCTCGCAG
GACACGCTTC TGTTTGTCGA TTGGGTCCGC AAGGCGGCCG CGACCGTCTA G
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| Protein sequence | MDHLPPLRLL VTFEAISRHG SMRDAAQRLN VTQPAVSQAL KALEDHVGVA LFDRSVRPAR
LTDAGEMLSR AVREGLGRIA ATLEDIRALH AIGERQVTVS CTLGMATYWL MPKLPMFYAD
YPELTVNVQA PATDLPVLSP GIDVALRYGR GGWREGRTEK LFAEVICPVG APALVERLLA
EGATLAEAPL IHVRNPHNDH WAGWEDYLQA RGIQRPRGGG QIFNNYVQAA QAIYDGRGLM
LGWRSITGQA ERDGALRAWP DGALDLGTSY FVTMPTTPSQ DTLLFVDWVR KAAATV
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