| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2004 |
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| Symbol | |
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| ID | 4077461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2109545 |
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| End bp | 2110426 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007319 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613998 |
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| Protein GI | 99081844 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGGC TGCCCCATGT CACCTGGCTT CGCTCCTTCG AGGCCGCCGC CCGTCACAGT
TCCTTCAGCG CCGCAGCCGA AGAGTTGCAC CTGACCCCCG CCGCAGTGAG CCAGCAAATC
CGGCAGCTCG AACACCACCT CGGGTTTCAG CTCTTCAAAC GCCTGCCCAA AGGGGTAGAG
CTGACCGACA TTGGCCAGGC CTATGCGATC CCGGTGCGCA AGTCGTTTGT GCAGATGCAA
GAAGCCACGG ATGGGCTGTT TCGGGTTCAG AGCAAATCCG TGCTGCGCGT GCGCTGCTCG
ATCAGCTTTG CGGCGCTGAT CCTGGCACCG CTCCTGCGCG ACTTCGCCGA AATCCATCCC
GACATCGACG TCGAACTCTC GACCGCAGTT TGGTCGGATC GGATGGAGGG CGCCGGGGTG
GATCTCGATA TTCGCTACGG CGCCGCCTGC TGGCCGGAGC AAAACGTCCA CCCGCTTCCG
GTCGAAGAGG CCACGTTGGT CTGCCACCCG GACTATGCCG CGCAGCTTGG CAGCGCGCTT
GATCCGGCAT GGCTCGGGGC AGCGGACATT GTGCAGATCG TGGGCTCCGA GACCGATTGG
GACCGCTATC TGCGGCTCTG CGGGATCGAT ACGCCGCGCC CGCGACACTG GATGAAGGCC
GATTCCTCGC TGATCGCCCT GCAGATCCTG TCGGCGGGGC GCGGCTGCGC CCTGATTTCG
CGCAGTTTCG CCCGTCAGGC GCTCAGCGAG GGACGCCTGG TTGCGCCTTT TGATCTGAGC
CTGCCGATGC AGGAGAGCTT TGTTCTGGTC GAGCGCGACG ACCTGAGGGA AAACCCGGGT
CTGCGCAAAC TTGTGGACTG GCTGCTGACG CAGAGGCTCT AG
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| Protein sequence | MRRLPHVTWL RSFEAAARHS SFSAAAEELH LTPAAVSQQI RQLEHHLGFQ LFKRLPKGVE
LTDIGQAYAI PVRKSFVQMQ EATDGLFRVQ SKSVLRVRCS ISFAALILAP LLRDFAEIHP
DIDVELSTAV WSDRMEGAGV DLDIRYGAAC WPEQNVHPLP VEEATLVCHP DYAAQLGSAL
DPAWLGAADI VQIVGSETDW DRYLRLCGID TPRPRHWMKA DSSLIALQIL SAGRGCALIS
RSFARQALSE GRLVAPFDLS LPMQESFVLV ERDDLRENPG LRKLVDWLLT QRL
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