| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1983 |
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| Symbol | |
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| ID | 4077167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2086629 |
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| End bp | 2087843 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007298 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_613977 |
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| Protein GI | 99081823 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.441158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATT CCGTGAAACT CTCCTCTGGT CGGTCTTATC TGGCGATTCC CGGGCCTTCG
GTGATGCCTG ATCAGGTGTT GCAGGCCATG CACCGCGCCT CGCCCAATAT CTACGCGGGC
GAACTGGTGG AGATGACCGG TACGCTGCCC GCGGATCTGC GCCGCGTGGC GCGCACGCAG
CATCATGTTG CGATCTACAT CGCCAACGGT CACGGCGCCT GGGAAGCGGC GTTGTCCAAC
ACTTTGCAAG AAGGCGACAA GGTCCTGGTG CCCGCATCCG GACGGTTCGC CTATGGCTGG
AGCGAAATGG CCGAAGCCCT CGGGATCAAC GTCGAGGTGA TGGATTTTGG CCTGCAAGCG
CCCTTTGATC TTGCGCGGGT GGCCGAGCGT CTGGCGGCGG ACAAGGCGTA TGAGATCAAG
GCGGTTTTGG GCGTTCACAC GGATACCTCG ACGTCGATCC GGAATGATAT CAATGGGTTG
CGCGCCGCCA TGGATGAGGT GGGCCATCCG GCGCTGTTGA TGGCGGATTG CATTGCGTCC
CTGGGCTGTG ACCGGTTCGA GATGGATGCC TGGGGCGTCG ATGTGATGGT GACGGGCTGT
CAGAAAGGGC TGATGGTACC AGCGGGGATG TCGTTTGTGT TCTTCAACGA CAAGGCGGCA
GAGGCCCGCG CGCGCCTGCC GCGGATCAGC CGCTACTGGG ACTGGGTGCC GCGGGCCAAC
CCGGAGTATT TCTACCAGTT CTTTGGCGGC ACCGCCCCGA CGCATCATCT CTATGGTTTG
CGGGCGGCGC TGGATCTGAT CCATGCCGAA GGCATCGAGC AGATCTGGAC CCGCCATGAG
ACTCTGGCCC GCGCGATCTG GGCCGCCTGT GACCGCTGGA GCGAAGGCGG GGCGCTGGCG
ATGAACGTTG CCGATCCAGC GTTGCGCTCC CACGCGGTGA CCGCGCTGCG CTTGCCGTCG
CCCCGCGCCA CGGATCTGCG GGTCTGGCTG GAGGAAAACC TTGGCCTCAC GCTCGGCATC
GGTCTTGGCA TGGCGCCGCC GGACAGCGCA GAGTGGCACG GGTTCTTCCG GCTGGGCCAT
ATGGGGCACG TCAATGGCCA CATGATCATG GGGCTTTTAG GAGGGATCGA GACCGGGCTT
CGGGCGCTCG ACATTCCGCA TGGCGCAGGC GCGCTGGAGT CGGCGGCAAA GGTGCTGGCA
GGCGCGCCGT CCTGA
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| Protein sequence | MRDSVKLSSG RSYLAIPGPS VMPDQVLQAM HRASPNIYAG ELVEMTGTLP ADLRRVARTQ
HHVAIYIANG HGAWEAALSN TLQEGDKVLV PASGRFAYGW SEMAEALGIN VEVMDFGLQA
PFDLARVAER LAADKAYEIK AVLGVHTDTS TSIRNDINGL RAAMDEVGHP ALLMADCIAS
LGCDRFEMDA WGVDVMVTGC QKGLMVPAGM SFVFFNDKAA EARARLPRIS RYWDWVPRAN
PEYFYQFFGG TAPTHHLYGL RAALDLIHAE GIEQIWTRHE TLARAIWAAC DRWSEGGALA
MNVADPALRS HAVTALRLPS PRATDLRVWL EENLGLTLGI GLGMAPPDSA EWHGFFRLGH
MGHVNGHMIM GLLGGIETGL RALDIPHGAG ALESAAKVLA GAPS
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