| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1980 |
|---|
| Symbol | |
|---|
| ID | 4077164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2083971 |
|---|
| End bp | 2084768 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638007295 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_613974 |
|---|
| Protein GI | 99081820 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGG AAAGCGCGCG TGTATCTGTC GAGATCCGCG ACCATGTGGC CCATGTCACC
CTGACCCGCG CCGACAAGAT GAACGCGGTG GACAAACACA TGCTGGCGGC CGTGATCGCC
GCCGCCAAAG AGGTTGCCGC CTCTGATGCC CGTGCGGTGG TGCTCTCTGG CGCGGGTAAG
AGCTTTTGCG CGGGCCTGGA TGTGATGAGC TTTGCCGCGA TGGGGCAGAT GCAGGACACC
GGCTGGATCA TGGATCGCAC CGAGGGGGAG GCCAATGACT TTCAGGCGGT GGCGATGATG
TGGCGCGCGC TTGAGATCCC GGTGATTGCG GCCTTGCAGG GGGCGACCTT TGGGGCGGGG
CTGCAGATTG CGCTCGGCGC AGACATCCGT ATTGCCGCGC CCGATGCCAA GCTTGCGGTG
ATGGAGATGA AATGGGGGCT GGTCCCCGAT ATGGGCGGCA TGGCGCTCTT GCCGCAGTTG
GTGCGCTCGG ATGTGCTGCG TCTGCTGACC TACAGCGCGA CCCCCATCGA GGCCACCCAA
GCCGAGACCT GGGGACTGGT GACGGAAGTG GCCGAGGACC CTCTGGCGCG CGCCGAGGCG
CTTGCGGCAG AGATCGCAGG CAAGGGCCCG CGCGCCATTC GCGCCGCCAA ACGCCTGATC
GCCTATGCCG AGAGCGGGGC CAGCACGGCG GATGTGCTGT TGCGCGAAAG CGAAGAGCAG
GCCGCCCTGA TCGGCAAGCC AGAGCAGATG GAAATCGTCA TGGCCAATAT GCAAAAGCGC
GCGCCCGTCT TCAAATAA
|
|---|
| Protein sequence | MAEESARVSV EIRDHVAHVT LTRADKMNAV DKHMLAAVIA AAKEVAASDA RAVVLSGAGK
SFCAGLDVMS FAAMGQMQDT GWIMDRTEGE ANDFQAVAMM WRALEIPVIA ALQGATFGAG
LQIALGADIR IAAPDAKLAV MEMKWGLVPD MGGMALLPQL VRSDVLRLLT YSATPIEATQ
AETWGLVTEV AEDPLARAEA LAAEIAGKGP RAIRAAKRLI AYAESGASTA DVLLRESEEQ
AALIGKPEQM EIVMANMQKR APVFK
|
|---|
| |