Gene TM1040_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1975 
Symbol 
ID4077159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2079901 
End bp2080233 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content64% 
IMG OID638007290 
Producthypothetical protein 
Protein accessionYP_613969 
Protein GI99081815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.152581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG CATTTCGATC CCTCATCGAA CGTCAGATGG CCAAGGCGGC CCAATCCGGT 
CAGCTCTCCG GGCTGGAAGG CGAAGGCAAG CCACTGCCCG ACCGAAGTGG CGAAGCTCTG
GTCGACCCGG GCCTGGCTGC CGGTGTGCGC ATCATGGCCG AGGCCGGCGC CGTCCCGGAA
GAATTCCCTT TGAAGAAGCA GCTCGACGCC GCCCGCGCGG CCTACCCCAA GATCACCGAT
CCCGACGCCC GCAAAGCGGC GATGGCGGAA CTTGCTGATC TGGAAATGCG CTACAATATG
GCACGCGATG CCCGCAAAGC GTTTTTTCGC TGA
 
Protein sequence
MIRAFRSLIE RQMAKAAQSG QLSGLEGEGK PLPDRSGEAL VDPGLAAGVR IMAEAGAVPE 
EFPLKKQLDA ARAAYPKITD PDARKAAMAE LADLEMRYNM ARDARKAFFR