| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1966 |
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| Symbol | |
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| ID | 4077150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2069965 |
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| End bp | 2070636 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007281 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_613960 |
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| Protein GI | 99081806 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.923392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.153951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAGG CAATTGTTCG TGAAACCGCC CCGATAACGC TGATTGGCGG AGGCGATGTC
ACCAGATCTG ATCTGGCCGA AGCGCTGGCG CATGCGCCGG TTCTTGTGGC CATCGACGGG
GGCGCGGATC AGGCGCTGGC GCTTGGGGCG CAGCCACAGG CGGTGATCGG CGACTTCGAC
TCGGTGTCAG ACCACGCCCG CACGGCGCTC TCACAGAGTA TACTGCATCT TGTCGCTGAA
CAGGAAACCA CTGATTTTGA CAAGGCGCTG CGCTCTGTCG AAGCGCCTCT CGTGCTGGCT
GTCGGAGTGC TTGGGGCGCG GCTTGATCAC CAGCTGGCGG CGCTGCATGT ACTGATGCAG
CCCCATGCCA AGACCTGCAT CCTGATCGGC GCGCATGAGG TGGTCGTGCA TCTTACCGCA
TCGCTCGAAC TGGAGTTGCA GGCGGGCGAT GTGGTGTCGC TGTTTCCGCT GTTGCCGGTG
TCCGGGCGCT CAGACGGGTT GGAGTGGCCG ATTGATGGGC TTGAGCTCTC GCCGCTCTCG
CGCATCGGAA CCTCCAACCG CGCCACCGGG TCGATCCGTA TCGAGGTCGA CGGACCAGGG
CTGTTGGCAA TCCTGCCGCG CCACTGTCTC GGCGCGCTTA TTCAGGTGAT GCAGGCAGGC
CCGTCTTGCT GA
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| Protein sequence | MTEAIVRETA PITLIGGGDV TRSDLAEALA HAPVLVAIDG GADQALALGA QPQAVIGDFD
SVSDHARTAL SQSILHLVAE QETTDFDKAL RSVEAPLVLA VGVLGARLDH QLAALHVLMQ
PHAKTCILIG AHEVVVHLTA SLELELQAGD VVSLFPLLPV SGRSDGLEWP IDGLELSPLS
RIGTSNRATG SIRIEVDGPG LLAILPRHCL GALIQVMQAG PSC
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