| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1945 |
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| Symbol | xseA |
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| ID | 4076896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2048352 |
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| End bp | 2049860 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007261 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_613940 |
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| Protein GI | 99081786 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0916178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC TCCTTGATGA TCCAACCCCG GGCCAGAACG CACCGGAGTT TTCCGTCTCC
GAGATTTCCG GCGAGGTCAA ACGCACGCTT GAGGGCACCT TTGGCCGCAT CCGCGTGCGG
GGCGAGGTCG GGCGTGTGTT CAAGGCGCGC TCCGGTCATC TTTATTACGA CATCAAGGAT
GATCGCTCGG TGCTGGCCTG CACGACCTGG AAGGGCCAGA TTTCGGGACT GTCCGTGGTG
CCCGAAGAAG GGCTTGAGGT GGTGGTGACC GGGCGCCTCA CGGCCTTTGG CGGACAATCC
AAATACAATA TGAATGTCGA TGAGGTCGCG GTTGCAGGCC AGGGCGCGCT GATGGCGCTC
TTGGAAAAGC GCAAGGCGCA ACTGGCCGCT GAAGGGCTGT TTGCACCCGA GCGCAAGAAA
CCGCTGCCCT ATCTGCCGGG GATCATCGGC GTCATCACGT CGCCTTCAGG CGCTGTGATC
CGTGACATCC TGCATCGGCT TCGGGATCGC TTCCCGCGCA AGGTGCTGGT CTGGCCCGTG
GCCGTGCAGG GCAGCAACTC GGCCCCCGAG GTGGCGCGCG CCATCGATGG GTTCAACGCT
CTGACGCCCG GCGGCGCCTT GCCCCGGCCG GACCTGATCA TTGTCGCGCG CGGCGGCGGG
TCCATCGAGG ACCTCTGGGG TTTTAACGAG GAGATCGTCG CCCGCGCCAC CGCCGCAAGT
GACATCCCGC TGATTTCGGC GGTGGGCCAT GAGACGGATA CCACGCTGAT CGACTACGTT
TCGGATCTGC GTGCCCCCAC GCCCACGGCG GCGGCAGAAC ACGCGGTGCC CGTGCGGCTC
GAGTTGTTGG GCTGGGTCGA AAATCAGGGC GCGCGCATGG CCAATGCCGC CAGCCGCGCG
GTGCAGCTGC GCCGCCAGCG GCTCGGAGAT ATGGCGCGCG CTCTGCCGCG CCCGGATACG
CTCTTGGAAA CCCCGCGCCA GCGGCTCGAC AGAGTCTCTG ACCGGCTGCC CAATGCGCTG
ATTTCGGGCG TGCAACGGCG CAAACTCACG CTCAGCGACC GCGCCGCCTC CCTCAGACCC
GCCACCCTGC GCGGTCTTGT TTCCAGCCGT CAGGACAAGC TCAAAAACCT TTCTTCGCGT
CTCACCCTAC GCCCGATCAC TCAGGATCTG GGGCGCAAAC GAGACGCGCT GGACCGCATC
ACCAAGCGCC TTAACACTGC CCAAAGCAGC CGCATCGACC GCCAGATTGA TCGTCTGTCA
GCCACGGCGC GACAGCTTGA TATTCTGAGC TACAAGGCCA CGTTGCGTCG CGGGTATGCT
GTGGTGCGCG ATGGCGCGGC CCTGGTCACA TCCACCGAAG GCGCCCGGAA GGCCGCTGAA
CTCTCTATCG AATTTGCTGA CGGCACGTTT GATGTCGCCA GCGCCCCCAG CACCACAAAG
AAATCCGCGC CCAAACCGGC GGCCCCGAAG GCGCCCAAAA CGCCCGGAGA GCAGGGCTCT
CTATTCTGA
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| Protein sequence | MSDLLDDPTP GQNAPEFSVS EISGEVKRTL EGTFGRIRVR GEVGRVFKAR SGHLYYDIKD
DRSVLACTTW KGQISGLSVV PEEGLEVVVT GRLTAFGGQS KYNMNVDEVA VAGQGALMAL
LEKRKAQLAA EGLFAPERKK PLPYLPGIIG VITSPSGAVI RDILHRLRDR FPRKVLVWPV
AVQGSNSAPE VARAIDGFNA LTPGGALPRP DLIIVARGGG SIEDLWGFNE EIVARATAAS
DIPLISAVGH ETDTTLIDYV SDLRAPTPTA AAEHAVPVRL ELLGWVENQG ARMANAASRA
VQLRRQRLGD MARALPRPDT LLETPRQRLD RVSDRLPNAL ISGVQRRKLT LSDRAASLRP
ATLRGLVSSR QDKLKNLSSR LTLRPITQDL GRKRDALDRI TKRLNTAQSS RIDRQIDRLS
ATARQLDILS YKATLRRGYA VVRDGAALVT STEGARKAAE LSIEFADGTF DVASAPSTTK
KSAPKPAAPK APKTPGEQGS LF
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