| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1942 |
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| Symbol | |
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| ID | 4076893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2045848 |
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| End bp | 2047008 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007258 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_613937 |
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| Protein GI | 99081783 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.104653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.157988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTT TCTCAAAGCT CAAGGAGCGG CTGCTGAAAT CCTCGTCCCG CCTCGGAAAA
GAGGTGGATG CGATTGTTGA AGAGGGGGCG GTCGCCCCTG AACAGGCGCC AGATCCTGCC
CCGGAAACGG CGTCTCCGGC GGCGCCTGCA GCGCAGCCCG CAGAGCGCGC GCCGGGTCCT
GAGCCTATTG AGGCGCCGGC GGCACGGGCG TCCACGTCCG CGCCAGCTCC GATCGTACCA
TCCGCCCCTG CAGAGGCGCC GGAGGCCTCC AGACCCGGCC TATTGGGGCG GCTCATGGGG
CGCACCAAGC CCTCCGAGCC GCGCCGGGTG CTGGATGACG ATATGCTGGA GAGCCTTGAG
GAGATGCTCA TCGCCTCTGA TATGGGCGTC GACACCGCGT TGCGCGTTAC GGCAAATATC
GCAGAAGGGC GTATGGGGCG TCGGGTCTCG GGCCGCGAAA TCCGCGAGCT TCTGGCAGCC
GAAATTGCCC GCGTGATGGA GCCAGTGGCC CGTCCGATGC CGCTCTATCC CTCCAAGCCG
CAGGTGGTGC TGGTCGTGGG CGTCAACGGC TCTGGCAAGA CCACCACCAT CGGCAAGCTG
GCAAGCCAGT TCCGTGCGGC TGGAAAATCC GTGGTGATTG CCGCGGGTGA CACGTTCCGC
GCCGCCGCTG TGGAACAGCT GCAGGTCTGG GGCGACCGCG CCGGGGTGCC GGTCTTGACC
GCGCCCGAAG GATCGGATCC CGCCAGCCTT GCCTTTGATG CCATGACCAA AGCCGAGGCC
GACGGGGCGG ATCTTTTGAT GATCGACACC GCCGGACGCC TGCAAAACCG CGCGGACCTC
ATGGAAGAGC TGGCAAAAAT CGTGCGGGTC ATTCGCAAGA AAGATCCCAA TGCGCCGCAC
AACACGCTGT TGGTTCTGGA TGCGACCACC GGGCAGAATG CGCTGTCGCA AGTCGAGACC
TTCCGCCAGC TAGCGGATGT TTCGGGGCTT GTGATGACCA AGCTCGACGG CACCGCCAAA
GGGGGCGTTC TGGTGGCGCT CGCCGACAAA TTCGGTCTGC CGATTCATGC GATCGGCGTG
GGTGAGCAGA TCGATGACCT CTCGCCGTTC GATCCCGAAG AATTCGCGGC CGCGCTTACC
GGTCTGGAAG AGGGCGCGTG A
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| Protein sequence | MALFSKLKER LLKSSSRLGK EVDAIVEEGA VAPEQAPDPA PETASPAAPA AQPAERAPGP
EPIEAPAARA STSAPAPIVP SAPAEAPEAS RPGLLGRLMG RTKPSEPRRV LDDDMLESLE
EMLIASDMGV DTALRVTANI AEGRMGRRVS GREIRELLAA EIARVMEPVA RPMPLYPSKP
QVVLVVGVNG SGKTTTIGKL ASQFRAAGKS VVIAAGDTFR AAAVEQLQVW GDRAGVPVLT
APEGSDPASL AFDAMTKAEA DGADLLMIDT AGRLQNRADL MEELAKIVRV IRKKDPNAPH
NTLLVLDATT GQNALSQVET FRQLADVSGL VMTKLDGTAK GGVLVALADK FGLPIHAIGV
GEQIDDLSPF DPEEFAAALT GLEEGA
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