| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1938 |
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| Symbol | |
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| ID | 4076889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2041410 |
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| End bp | 2042597 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007254 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_613933 |
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| Protein GI | 99081779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.168999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA GCTGGAACAA ACGCACCAAA CTGGTCCATG GCGGCACCCG ACGCAGCCAG
TACAACGAGG TCAGCGAAGC GATCTTTCTG ACCCAGGGGT TTGTGTACGA CAGTGCAGAG
CAGGCGGAGG CCCGGTTCAT CGAGACCGGC GCGGATGAAT TCATCTACGC CCGCTATGGC
AATCCGACCG TGGCAATGTT TGAAGAGCGC ATCGCCCTTT TAGAAGGGGC CGAGGATGCC
TTTGCCACCG CATCGGGCAT GGCGGCGGTG AATGGCGCGC TCACGTCGAT CCTGAAAGCG
GGCGACCATG TGGTCTCTGC CAAGGCGCTC TTTGGGTCCT GTCTTTATAT TCTCGAAAAC
ATCCTGACCC GGTATGGGGT CGAGGTGACA TTTGTCGACG GCACGGATCT GGACCAGTGG
CGCGCTGCCG TGCGCCCGGA CACCAAGGCC GTGTTTTTTG AGAGCATGTC GAACCCAACG
CTGGAAGTCA TTGATATTGA AGGCGTTGCC GAGATCGCCC ATGCGGTCGG CGCGACCGTT
GTGGTCGATA ATGTGTTCTC TACTCCGGTG TTTTCCAATG CCATCGCGCA AGGCGCGGAT
GTGGTGGTGT ATTCGGCCAC CAAACATATC GACGGGCAGG GGCGTGCGCT TGGCGGCGTG
GTGCTTGGCA CCAAGGATTA CATTCGCGGC ACGCTCGAAC CCTACATGAA ACATACCGGT
GGCTCGCTGA GCCCGTTTCA TGCCTGGATG TTCGTCAAGG GGCTTGAGAC CATTGATCTG
CGCGTCAATG CTCAGGCTGC CAGCGCGCTC AAGATCGCCG AGGCCTTTGA GAGCCATCCA
GTCTTGGCTC GCACCATCTA TCCGGGCCTG AAAACCCACG CGCAGAATGC GCTGGTGCAG
CGCCAGCTTG GAGGCAAGGG TGGGACGGTG CTGTCGCTCG ACCTCAAGGG CGGCAAGGAG
GCGGCCTTCG CCTTTCTCAA TGCGCTCTCC ATTCCGGTGA TCTCCAATAA TCTGGGCGAT
GCCAAATCCA TTGCCACCCA TCCGGCCACC ACCACGCACC AACGTCTTTC CGAGGCGCAG
CGCGCAGAAC TCGGGATCAC CGATGGTCTG GTGCGGTTTT CGGTCGGGCT TGAGGATGCG
GATGATCTGA TCGCGGATCT GTCACAGGCG CTGCAAACGC TGGCGTGA
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| Protein sequence | MTESWNKRTK LVHGGTRRSQ YNEVSEAIFL TQGFVYDSAE QAEARFIETG ADEFIYARYG
NPTVAMFEER IALLEGAEDA FATASGMAAV NGALTSILKA GDHVVSAKAL FGSCLYILEN
ILTRYGVEVT FVDGTDLDQW RAAVRPDTKA VFFESMSNPT LEVIDIEGVA EIAHAVGATV
VVDNVFSTPV FSNAIAQGAD VVVYSATKHI DGQGRALGGV VLGTKDYIRG TLEPYMKHTG
GSLSPFHAWM FVKGLETIDL RVNAQAASAL KIAEAFESHP VLARTIYPGL KTHAQNALVQ
RQLGGKGGTV LSLDLKGGKE AAFAFLNALS IPVISNNLGD AKSIATHPAT TTHQRLSEAQ
RAELGITDGL VRFSVGLEDA DDLIADLSQA LQTLA
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