| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1924 |
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| Symbol | |
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| ID | 4076875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2024543 |
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| End bp | 2025112 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007240 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_613919 |
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| Protein GI | 99081765 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.147097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA CCAGAGAGCG TATTGTCGCG CAGGCGGATG AGCTGTTCTA CACGCGCGGT
TTTGAGGCCA CGTCCCTGGC CGACATCGCG GCACCTCTCG GCCTGTCGCG CGGGAATTTC
TATTATCATT TCAAGACCAA AGACGAGATC CTTGAGGCGG TGATCGACCT TCGGCTGGAG
CGCACAGCGT TGATGCTGCG CGCCTGGGAA ACCGAGAGCG ACACGCCGCT TGATCGCATC
ATCTGTTTCA TCCGGATTCT GATTCAGAAC CGCAGCAAGA TCATGGCTTG GGGCTGCCCG
GTGGGCACTT TGGTAAGCGA GCTCTCAAAG CTCGAGCATG TCGCACATAC GCATGCGGCA
GAGCTATTCC GGCTTTTTAT CGACTGGCTT GCCGAGGAGT TTCGCCGCGC CGGTCGCACG
CAGGACGCCG AGGCGCTGGC GACTCATCTG ATGGGGCGCA GCCAGGGCGT CGCGGCACTG
GCGCAGGCTT TTGCGGATCC GGCACTGATC GAGGCAGAGG TGCAGCAGAT GACAGACTGG
GCGCGTCAAC AGATCGCCGC GCCCGCCTGA
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| Protein sequence | MAQTRERIVA QADELFYTRG FEATSLADIA APLGLSRGNF YYHFKTKDEI LEAVIDLRLE
RTALMLRAWE TESDTPLDRI ICFIRILIQN RSKIMAWGCP VGTLVSELSK LEHVAHTHAA
ELFRLFIDWL AEEFRRAGRT QDAEALATHL MGRSQGVAAL AQAFADPALI EAEVQQMTDW
ARQQIAAPA
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