Gene TM1040_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1923 
Symbol 
ID4076874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2024218 
End bp2024511 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content60% 
IMG OID638007239 
ProductYCII-related 
Protein accessionYP_613918 
Protein GI99081764 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.821027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTGA TCTGTTTGAA GTTGACCGCA GACAGGGAGC GTATCTCTGG CGTGCTTGAA 
GCGCACAAGG CTTGGCTGGC GCAGGGATTT GAAGACGGAG TCTTCCTTCT GGCGGGCGCG
CTGGATGATG GACCGGGTGG ACTGATCCTG GCAGTTGGCG AGGACCGCGC CGCGTTGGAG
GAGAGACTTG CGACAGATCC TTTTGTGCGC GACGGGCTGG TTGCGGTGGA TATCACCGCC
TTCACCCCCT CTCAGGCGGA TCCGCGGCTT TCATTCCTCA AGGTGGCGGC ATGA
 
Protein sequence
MFVICLKLTA DRERISGVLE AHKAWLAQGF EDGVFLLAGA LDDGPGGLIL AVGEDRAALE 
ERLATDPFVR DGLVAVDITA FTPSQADPRL SFLKVAA