| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1919 |
|---|
| Symbol | gatC |
|---|
| ID | 4076870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2020838 |
|---|
| End bp | 2021125 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007235 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
|---|
| Protein accession | YP_613914 |
|---|
| Protein GI | 99081760 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
|---|
| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.941593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTG ACCAAAGCAC AGCCGCGAAA GTGGCCAAAC TGGCCCGGAT CAAGGTCGAA
GAGGACGCTC TGCCTGCGCT GGCAGAGGAG TTCAACACGA TCCTCGGGTT CATCGAGCAA
CTGAACGAAG TAGATGTCGA GGGTGTCGAG CCGATGACCT CCGTCACCCC GCAGCGCCTC
AAGCGCCGCG AGGATGTGGT CACCGATGGC AACCAGCAGG ACAAAGTGCT GGCCAATGCC
CCAGATGCCC GCGAAGGCTT CTTTGCTGTG CCCAAGGTTG TGGAGTAA
|
|---|
| Protein sequence | MSIDQSTAAK VAKLARIKVE EDALPALAEE FNTILGFIEQ LNEVDVEGVE PMTSVTPQRL
KRREDVVTDG NQQDKVLANA PDAREGFFAV PKVVE
|
|---|
| |