| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1918 |
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| Symbol | gatA |
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| ID | 4076869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2019347 |
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| End bp | 2020834 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007234 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_613913 |
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| Protein GI | 99081759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC TGAACAAACT GGGCCTTGCA GAGGCCCGCG ATCTGCTGCG CAAGGGTGAC
ACCACCTCTG TGGAACTCAC CGAGGCCTGC CTCAAGGCCA TCGACGGCGC GGATGCGCTC
AACGCGTTTG TGCATAAGAC CCCCGACGTC GCTCTGGACC GTGCGAAGGC GGCGGACGCG
CGGATTGCCG AGGGCGATGC GCCCGCCATG TGCGGCCTGC CCATCGGCAT GAAGGACCTC
TTCTGCACCA AAGGCGTCGA CAGCCAGGCG GCGTCGAACA TCCTCAAGGG CTTCAAGCCC
GAATATGAAT CCACCGTCTC GCAGAAACTG CAGGACGCCG GTGCGGTGAT GCTCGGCAAG
CTCAATATGG ACGAATTTGC CATGGGCTCG TCGAACGAGA CCTCCGCCTA TGGCAATGCC
ATCAGCCCAT GGCGGCGCGA GGGGGACGAA ACCCCGCTGA CGCCCGGTGG CTCTTCTGGT
GGCTCGGCGG CGGCTGTGGC GGCAGACCTG TGCCTTGCCG CCACCGGCAC CGACACCGGC
GGCTCGATCC GCCAGCCTGC GGCCTTCACC GGCACCGTTG GCATCAAGCC CACCTATGGG
CGCTGCTCGC GCTGGGGCAT CGTGGCCTTT GCCTCCTCGC TCGATCAGGC TGGCCCGATG
ACCAAGAATG TGCGCGACGC CGCCATCATG CTCGAGGCCA TGTGCGGCCA TGACGCGAAG
GATTCGACCT CTGTGGACCT CGCGGTGCCG AACTTCGAGG CGATGCTGAC CGGCGACATC
AAAGGCAAGA AAATCGGCAT CCCGCGCGAA TACCGCATGG ACGGTATGCC CGCCGAGATC
GCCAAGCTCT GGGATGAGGG CGCCGCGATG CTCAAGGCCG CGGGCGCTGA GATCGTAGAC
ATCTCGCTGC CGCACACGAA ATACGCGCTG CCCGCCTATT ACGTGATTGC CCCGGCTGAG
GCCTCTTCGA ACCTGGCGCG GTACGACGGT GTGCGCTACG GCCACCGCGC GACGCTCGCG
CAGGGGGACG GCATCACCGA GATGTACGAG AAAACTCGCG CCGAAGGCTT TGGCCACGAG
GTGCAGCGCC GCGTGATGGT CGGCACCTAT GTGCTGTCGG CAGGGTTCTA CGACGCCTAT
TACAACCGCG CGCGCAAGGT CCGCACCTTG ATCAAGAAGG ATTTCGAAGA TGTCTTTGCT
GCGGGTGTGG ACGCGATCCT GACCCCGGCG ACGCCCTCCG CGGCTTTTGG CCTTGGCGAG
ATGAACGACG AAGATCCGGT CAAGATGTAC CTCAACGACG TCTTCACTGT CACCGTGAAC
CTAGCGGGCC TGCCCGGGAT TTCGGTGCCA ACCGGCGTCG ACACGCAGGG GCTGCCGCTC
GGTCTGCAAT TGATCGGACG TCCATGGGAC GAGGGCGATC TTCTGAATAC CGCCTACGCG
CTGGAGCAAG CGGCCGGATT TGTGGCCAAG CCCGCCCAGT GGTGGTAA
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| Protein sequence | MSDLNKLGLA EARDLLRKGD TTSVELTEAC LKAIDGADAL NAFVHKTPDV ALDRAKAADA
RIAEGDAPAM CGLPIGMKDL FCTKGVDSQA ASNILKGFKP EYESTVSQKL QDAGAVMLGK
LNMDEFAMGS SNETSAYGNA ISPWRREGDE TPLTPGGSSG GSAAAVAADL CLAATGTDTG
GSIRQPAAFT GTVGIKPTYG RCSRWGIVAF ASSLDQAGPM TKNVRDAAIM LEAMCGHDAK
DSTSVDLAVP NFEAMLTGDI KGKKIGIPRE YRMDGMPAEI AKLWDEGAAM LKAAGAEIVD
ISLPHTKYAL PAYYVIAPAE ASSNLARYDG VRYGHRATLA QGDGITEMYE KTRAEGFGHE
VQRRVMVGTY VLSAGFYDAY YNRARKVRTL IKKDFEDVFA AGVDAILTPA TPSAAFGLGE
MNDEDPVKMY LNDVFTVTVN LAGLPGISVP TGVDTQGLPL GLQLIGRPWD EGDLLNTAYA
LEQAAGFVAK PAQWW
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