Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1913 |
Symbol | |
ID | 4077410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2015026 |
End bp | 2015805 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638007229 |
Product | hypothetical protein |
Protein accession | YP_613908 |
Protein GI | 99081754 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.841584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGT TTGACAGCAT TCGGTCTGCT GCCGGCGCAC GCAGCGCCGA GATCGACGCA GGGCTTCGCG CCCACATGAA CAAAGTCTAC GGCACCATGT CCGTAGGTAC ACTGATCACA TTCCTTGCGG CCTGGGCGAT TGCCGGTCTG TCGGTCACCT CTGACCCGGC CAATGCCGTC GCGCAGCTGA GCTCTGACAG CTACCTGACC AACTTCGGTT ACGCGATCTA TGCCTCGCCG CTGAAGTGGG TGATCATGTT CGCACCGCTG GCCTTTGTGT TCTTTGGCTT TGGCGCCGCC GTGAACCGCC TCTCCGCCGC GGGCGTCCAG GTCGTGTTCT ACGCCTTTGC TGCGCTGATG GGTCTGTCGA TCTCTTCGAT CTTCGTGACC TTCACCGGTG AAAGCATCGC GCAGGTGTTT CTTGTGACCT CCATCGCCTT TGCGGGTCTG TCGCTGGTGG GCTACACCAC CAAGAAAGAC CTCTCCGGCA TGGGGTCGTT CCTGATCATG GGCCTCATCG GCCTGATCGT GGCGTCGGTT GTGAACATCT TCCTCGCCTC CTCGGCGATG GCCTTTGCGA TCTCCGTGAT CGGCGTGCTG ATCTTTGCAG GTCTCACTGC TTATGACACC CAGCGCATCA AGAACGACTA CCTGCAGATG GCACATGCAG GGGACCAGGA GTGGCTCGGC AAAGCCGCCA TCATGGGCGC CCTCAGCCTC TATCTGGACT TCATCAATAT GTTCATGATG CTGCTCCAGC TGCTCGGGAA CCGCGAATAA
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Protein sequence | MAQFDSIRSA AGARSAEIDA GLRAHMNKVY GTMSVGTLIT FLAAWAIAGL SVTSDPANAV AQLSSDSYLT NFGYAIYASP LKWVIMFAPL AFVFFGFGAA VNRLSAAGVQ VVFYAFAALM GLSISSIFVT FTGESIAQVF LVTSIAFAGL SLVGYTTKKD LSGMGSFLIM GLIGLIVASV VNIFLASSAM AFAISVIGVL IFAGLTAYDT QRIKNDYLQM AHAGDQEWLG KAAIMGALSL YLDFINMFMM LLQLLGNRE
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