| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1911 |
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| Symbol | |
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| ID | 4077408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2013545 |
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| End bp | 2014462 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007227 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_613906 |
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| Protein GI | 99081752 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAACT TGGACATAAC CACCCTGCGC TCGTTTGTGG CGGTTGCAGA CACCGGCGGT
GTCACCCGTG CGGCGTCATT CCTGCACCTG ACGCAATCGG CGGTTTCCAT GCAGCTCAAG
CGTCTTGAGG AAATGTTGGG TGTGGAGCTT CTGGACCGTT CAGGGCGCAA CATCGGCCTG
ACCTCGGCCG GAGAGCAGCT CTTGGGCTTT GCGCGCAAGA TGCTCAGCCT CAATGACGAG
ATCATCACCC GCCTGACCGA TCAGGCCTTT GAGGGCGAAG TGACACTTGG TGTGCCTCAT
GATGTGGTGC ATCCGGTGAT CCCGATGGTG ATGCAGCGCT TTAATGTGCA GTTCCCACGG
GTGAAGGTGA ACCTCTGCAC GTCCAATACG CGCGATCTCA AGATGGATTT TGCCCAGGGG
CGGTTTGATC TCATCGTGAC CACTGAAACC ACCGCAAGCG AGGGCGGCGA GGTCATTCAC
CAGATGCCGC TGCGCTGGAT TGGCGCGCTT GGTGGGCAGA CCTGGCGGCA GCGCCCGCTC
CGGATCGGGT TCTGTCGCAA TTGTATCTTT CGCGGACTGG CGACAGCGGC GCTTGATGAT
GCGGGCATCC CGTGGGAGAT GGCCGTGGAC AGCGAATCCG ACCGTACCGT GGAGGCCACG
GTCAGCGCCG ATCTTGCAGT GGGCGTCTTG CTGGAAGGCA CGCAGCCCGC GCATCAGCAG
GTGATCGACC ACGGGGGCAG CCTGCCGCAG CTGCCGGTGC AACACATCAA CCTCTACGGC
GCTGAACGGT CAAGGGCGCA ATATGTCGAC CACCTCGCAA GCCTGATCCG TCAGGGTTTT
GCCGGGCTGT CTCAGCCGGG GTTGCGCGCC GTGGGCACAG AAATGGTCAG CGCACCCGTC
CAGCTTGGGG TTGTATGA
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| Protein sequence | MRNLDITTLR SFVAVADTGG VTRAASFLHL TQSAVSMQLK RLEEMLGVEL LDRSGRNIGL
TSAGEQLLGF ARKMLSLNDE IITRLTDQAF EGEVTLGVPH DVVHPVIPMV MQRFNVQFPR
VKVNLCTSNT RDLKMDFAQG RFDLIVTTET TASEGGEVIH QMPLRWIGAL GGQTWRQRPL
RIGFCRNCIF RGLATAALDD AGIPWEMAVD SESDRTVEAT VSADLAVGVL LEGTQPAHQQ
VIDHGGSLPQ LPVQHINLYG AERSRAQYVD HLASLIRQGF AGLSQPGLRA VGTEMVSAPV
QLGVV
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