| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1890 |
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| Symbol | |
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| ID | 4077387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1991345 |
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| End bp | 1991974 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007206 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_613885 |
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| Protein GI | 99081731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1279] Lysine efflux permease |
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| TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.34738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCCC TCCCGATGAC CCCAGACATG CTGCCAATTC TGATGGCAGG CTTTGGCCTT
GGCTTCAGCC TCATCCTTGC GATTGGCGCG CAGAACGCTT TTGTGCTGCG GCAGGGGATA
CGCGGCCAGC ATGTCTTGCC AATCGTGCTG ACCTGCGCTC TGTCGGATGC GCTGCTGATC
ACGGCGGGGG TTGCGGGCTT TGGGACGCTG ACCTCTGCGT TGCCGTGGTT CGAGCCCGTG
ATGCGCATCG GCGGCGCGCT GTTCCTGACC GGCTACGGGC TGCGGTCGCT GCGCTCGGCG
TGGACGGGCG GGGCTGCGCT TTCGACCGAG GGGCAGGGGG TTCAGACCGC GCTCTGGCCA
GCGGTTCTGA CCTGCCTCGC CTTCACCTGG CTCAATCCGC ATGTCTATCT CGACACGGTT
GTGCTGCTGG GCGCGATCTC GGCGCAATAT ACGCCGGCCT GGGTCTTTGG CCTTGGTGCG
GTGACGGCCT CTTTTGTGTT CTTTTTCACG CTCGGGTATG GAGCGCGGCT GCTGGCACCG
ATCTTTGCCC GCCCCCGCGC GTGGCAGGTG CTGGACGCGC TGATCGGCGT GGTCATGCTG
GCGCTTGCGG TCAAGCTCGC GCTGATGTGA
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| Protein sequence | MQPLPMTPDM LPILMAGFGL GFSLILAIGA QNAFVLRQGI RGQHVLPIVL TCALSDALLI
TAGVAGFGTL TSALPWFEPV MRIGGALFLT GYGLRSLRSA WTGGAALSTE GQGVQTALWP
AVLTCLAFTW LNPHVYLDTV VLLGAISAQY TPAWVFGLGA VTASFVFFFT LGYGARLLAP
IFARPRAWQV LDALIGVVML ALAVKLALM
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