| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1888 |
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| Symbol | |
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| ID | 4077385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1988725 |
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| End bp | 1990362 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007204 |
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| Product | ABC transporter related |
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| Protein accession | YP_613883 |
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| Protein GI | 99081729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC CCTCCGCTTG CGTCCTGCTC GACGGGTTGC GCTGGTCCGC CGCTGACGCG
CGACCGCTTT TCTCTGATCT TACCCTTCAT CTGCAATCCG GACGGATGGG TCTTGTCGGC
CGAAACGGCT CTGGCAAGAC AACACTTCTG CGTCTGATTG CAGGCGACCT GCCCCCTGAG
GGCGGGCGCG TACAGGTCTC TGGCCGTCTG GGATGGATGC GACAGGAGGT GGCCAGCGCG
GCGCATCTCA CGGTGGCTGA TCTCTTTGGG GTAGCCCCTG CCCTTGCGCG GTTGCGGCGT
ATCGAGCGCG GCGTGGCCAC GGACACCGAC CTGGCCGAGG CAGATTGGAC GCTGCCCGCG
CGCATTGAGG CAGCCTTGCA ACGCTGCGGG GTGTCCGTCG CGCCAGAAGA GCCGCTCGCG
CCGCTTTCGG GAGGGCAGCG CACGCGTGTG GCGCTGGCCG CGCAGATCTT TCAGGCACCC
GATATTCTGC TTCTGGATGA GCCCACAAAC ACGCTTGATG CCGAGGGGCG CGCCATGGTG
CGGAGGCTGC TGCGCGACTG GCGCGGCCTT GCGCTGGTGG TGAGCCATGA TCGCGCTGTT
TTGGAAGAGA TGGACGCGAT CGTGGAGCTG CGGGCGGGTG GCGCCCAGCG CTATGCAGGC
CCTTACAGCC AGTATCGCGC CGAGCGGGAC ATGGAGCTGG CTGCGGCCTA TCAGGACCTT
CATGAGGCCG AGAAGACCCG CAAGGAAACC ATGCGCCGCG CCCAGGACGC CACAGAGCGC
AAGGCCCGGC GCGACAGCCA AGGCCGGGCG GCGCGGGCGT CAGGAAGTCA GCCCAAGGTG
TTGCTGGACA AGGCAAAAGA ACGTGCCGAG GCCTCCAAGG GAGCGGGCGT TCGGCTGCGC
GAGGCCCGGC GCACCGAGGC CGAGGCCGCC CTTGCTGATG CGCGTGAGCG CATAGAGGTG
CTTGAACCGA TCCAGATGGA GATCCCCGCA ACCGGCCTGC GGAACCAGAC GCGCCTCGTC
GCGCTGCAGC ACATCACCGC GGGCTATGGC CCCCATACGG TTTTGCGGGA TTTTTCACTG
GAGATCACCG GGCCGGAGCG GATCGCCGTG ATGGGCCCCA ATGGCTGTGG CAAGACCACG
CTGTTGTCAC TGATCCTCGG ACATCTTGAG CCACACGCCG GGCACATCAC GCGCCCGGCA
GAGGCGGCAC TGCTGGATCA GCATCTGAGC CTCTTGAAGA GCGACGAGAC GCTCTTGGAA
AATTACCTTC GGCTCAACCC CGGTGTGGGA GCGCAGGATG CCCATGCGGC GCTGGCGCGG
TTTCGGTTTC GCGCCTCCGA GGCGCTGTGG CAGGCCGCGG CGCTCAGTAG CGGGCAGCGG
CTTCGGGCGG GGCTCGCCTG CACGCTGGCA CGTCCAACTC CGCCGCCGCT TCTGGTGCTG
GACGAGCCGA CCAATCACCT TGATTTTGAG GGGCTGGAGG CACTGGAGGC GGCGCTTTTG
GGGTATGACG GTGCGCTCAT CGTGGTGAGC CACGACAGCG CGTTCCTTGA CCGGATCGCT
CTCACCCGCC GCCTCGTGCT GCCGTCTCAG CGCTCGGGCA GCGGGATAAA TTCACTGTCA
TCGCCCGGTG GCAGCTGA
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| Protein sequence | MSSPSACVLL DGLRWSAADA RPLFSDLTLH LQSGRMGLVG RNGSGKTTLL RLIAGDLPPE
GGRVQVSGRL GWMRQEVASA AHLTVADLFG VAPALARLRR IERGVATDTD LAEADWTLPA
RIEAALQRCG VSVAPEEPLA PLSGGQRTRV ALAAQIFQAP DILLLDEPTN TLDAEGRAMV
RRLLRDWRGL ALVVSHDRAV LEEMDAIVEL RAGGAQRYAG PYSQYRAERD MELAAAYQDL
HEAEKTRKET MRRAQDATER KARRDSQGRA ARASGSQPKV LLDKAKERAE ASKGAGVRLR
EARRTEAEAA LADARERIEV LEPIQMEIPA TGLRNQTRLV ALQHITAGYG PHTVLRDFSL
EITGPERIAV MGPNGCGKTT LLSLILGHLE PHAGHITRPA EAALLDQHLS LLKSDETLLE
NYLRLNPGVG AQDAHAALAR FRFRASEALW QAAALSSGQR LRAGLACTLA RPTPPPLLVL
DEPTNHLDFE GLEALEAALL GYDGALIVVS HDSAFLDRIA LTRRLVLPSQ RSGSGINSLS
SPGGS
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