| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1886 |
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| Symbol | |
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| ID | 4077383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1986308 |
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| End bp | 1987381 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007202 |
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| Product | integral membrane protein-like |
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| Protein accession | YP_613881 |
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| Protein GI | 99081727 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5480] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCC CGGCTGTTAG GCGCCTGTGC CTGCTGGCCG CTACGCTCGC CTTGCCGTCT
GCGGGGCAGG CGGCGCTTGA CCTGTGCAAC GACACCACCG CGGCGCAGCG GGTGGCAATC
GGCTTTCAGG AGGCGGGCGA CTGGACCTCA AAAGGCTGGT GGGATCTGCC TGCTGGCAGC
TGTACAGAGG TGCTCTCTTC CGCGTCGACA AGCCGGTTTT ATTATCTGCG GGTAGAGACC
GAGGGCTGGG CCTTCACCGA TGACAGGCTT GGGTTTTGCG TTGCTGACAC GGATTTTGAA
ATCAAGGGCG AAGATGGGTG CGCGCGCCGT GGCTTTCGCC AGGAGAATTT CGCACGGATC
GACACCAGGG GCGCCGCTGC ACCCGACCCA ACAGCCCAGA CGCGGCCAGC CGCAGATCCG
GACACTGGGT CCGACGCCGC GCGCAGGACT TTTACACACC ACCTCAGCGC CCATCTCACT
CCGATCAAAT CCGACGTCCC GGCGCGCCAT GTGGTTCAGT CCGGGTTCAG CACCAAAGCC
GTGTTTCAAG GCTGTGATGC GGAAACCACC GCCTATGCCA GCTTTTGCAC CTTCATCGGC
GCCGGGCGGC GCTATCTGGT TTATGACGAC GGGCGCACCT CCGCCGCGCT CTGGCAGGAG
ATCCAGCAAG CCATCCGCGG GCGACGCTAC ACGCTCGAGG GTTTGCGAGA GGATCTTTTT
GACACCACGT CAGAACTGGT TCTGCGCGCC ATCCGACCAG AGCCCGAGGA TCGCTCGGAT
CAGCTCTTGG CCAGCCTGCA GGGTCTCTGG CGCTCCACCA TCGATCCCAA TGACAGCTTT
CGCGTCAGCG GGGCCGAGCG CATAAACGCC TATGCCGGGG CGGAAACATC GGTCGAATAC
CTCTCATTGC ACAAACCCTG CGCCGAGGCG GGCGACGTGG GTCCCTTCCT TTTTACCTGG
GACAACAATT CCGGCACCAG CCTGTGCTAC GCCATTGCCC GCCTCACTGA CACCGAACTG
GCGCTGATCT ACCTTCCGCG CGGGACCGAA CTGGTCTACC GCCGCGAGGG CTGA
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| Protein sequence | MSFPAVRRLC LLAATLALPS AGQAALDLCN DTTAAQRVAI GFQEAGDWTS KGWWDLPAGS
CTEVLSSAST SRFYYLRVET EGWAFTDDRL GFCVADTDFE IKGEDGCARR GFRQENFARI
DTRGAAAPDP TAQTRPAADP DTGSDAARRT FTHHLSAHLT PIKSDVPARH VVQSGFSTKA
VFQGCDAETT AYASFCTFIG AGRRYLVYDD GRTSAALWQE IQQAIRGRRY TLEGLREDLF
DTTSELVLRA IRPEPEDRSD QLLASLQGLW RSTIDPNDSF RVSGAERINA YAGAETSVEY
LSLHKPCAEA GDVGPFLFTW DNNSGTSLCY AIARLTDTEL ALIYLPRGTE LVYRREG
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