| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1883 |
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| Symbol | |
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| ID | 4077380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1982575 |
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| End bp | 1984032 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007199 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_613878 |
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| Protein GI | 99081724 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.86306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACATC CGGCCCAGCC CAAAGCCAGC CATTTCATCA ATGGCGAATA TGTCGAAGAC
ACCTCCGGCA CCCCGATCCC GGTGATCTAT GCTGCCACTG GCGAGACCAT CGCCACCGTT
TACGCGGCCA CACCTGCAAT CGTCGAGCAG GCGCTGACCG CCGCTGAGGC TGCGCAGAAA
GAATGGGCCA AGATGTCCGG CACCGAGCGC GGCCGGGTGC TGCGCCGCGC CGCCGACATC
ATGCGTGAAC GCAATCACGA ACTGTCGGTG CTGGAAACCT ATGACACCGG CAAGCCCCTG
CAGGAAACCC TGGTCGCGGA TGCCACCTCT GGTGCGGATG CACTTGAATA TTTCGGGGGC
CTCGCGGGCA GCCTCACCGG CGAGCACATC CAGCTTGGCG AAGACTGGGT CTATACCGTG
CGCGAGCCGC TTGGCCTCTG TGTGGGGATC GGCGCGTGGA ACTACCCCAC CCAGATCGCC
TGCTGGAAGG GCGCACCGGC ATTGGCCTGT GGCAACGCCA TGGTGTTCAA ACCTTCCGAG
ACCACGCCGC TCTGCGCGCT CAAGGTGGCC GAGATCCTGA TGGAGGCCGG CGCGCCAGCC
GGGCTTTACA ACGTCATTCA GGGCATGGGC GAAGTGGGCG GCAAACTGGT CACGGACCCG
CGCGTCGACA AGGTCTCGCT CACCGGCTCC GTTCCGACCG GCAAAAAGGT CTATGCGGCT
GCGGCTGAGG GCATGAAACA TGTAACCATG GAGCTGGGTG GCAAATCCCC GATGATCGTC
TTTGAAGACG CCGACATCGA GAGCGCCATC TCCGGTGCCA TCAACGGCAA CTTCTATTCC
TCGGGTCAGG TCTGCTCGAA CGGCACCCGC GTCTTTGTTC ACAAGGACAT CAAGGAGAAG
TTCCTCGCCC GTCTGGCCGA GCGCACTGCG ACAGCCAAAC TGGGCGATCC GATGGATGAG
AGCGTGAACT TTGGCCCGAT GGTCAGCGAG CGCCAGATGG AGATCGTGCT CGGTTATATC
GAGAAGGGCA AATCCGAGGG CGCGCGCCTG ATTTGTGGTG GCAACCGCGC TGATATGGAT
GGCTTTTTTG TGGAGCCCAC GGTCTTTGCC GATGTCAAAG ACGATATGGT GATCGCCCGC
GAAGAGATCT TTGGCCCGGT CATGTGCGTT TTGGATTTCG AGAGCGAAGA CGAGGTGATC
GCCCGCGCCA ATGATACCGA ATTTGGTCTC TCGGCAGGGG TCTTCACCAA GGATTTCACC
CGCGCGCACC GGGTGATCGG TCAGCTTGAG GCCGGCAGCT GCTTTATCAA TTCCTACAAT
GACGCACCCG TCGAGGCGCC CTTTGGTGGC GTCAAAGCCT CTGGCGTGGG GCGTGAAAAT
TCCAAGGAAG CGATCAAGCA CTTCAGCCAG GTGAAGTCGG TCTACGTGCG CATGGGCGAC
TGCGAAGCAG CCTTCTAA
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| Protein sequence | MTHPAQPKAS HFINGEYVED TSGTPIPVIY AATGETIATV YAATPAIVEQ ALTAAEAAQK
EWAKMSGTER GRVLRRAADI MRERNHELSV LETYDTGKPL QETLVADATS GADALEYFGG
LAGSLTGEHI QLGEDWVYTV REPLGLCVGI GAWNYPTQIA CWKGAPALAC GNAMVFKPSE
TTPLCALKVA EILMEAGAPA GLYNVIQGMG EVGGKLVTDP RVDKVSLTGS VPTGKKVYAA
AAEGMKHVTM ELGGKSPMIV FEDADIESAI SGAINGNFYS SGQVCSNGTR VFVHKDIKEK
FLARLAERTA TAKLGDPMDE SVNFGPMVSE RQMEIVLGYI EKGKSEGARL ICGGNRADMD
GFFVEPTVFA DVKDDMVIAR EEIFGPVMCV LDFESEDEVI ARANDTEFGL SAGVFTKDFT
RAHRVIGQLE AGSCFINSYN DAPVEAPFGG VKASGVGREN SKEAIKHFSQ VKSVYVRMGD
CEAAF
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