Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1878 |
Symbol | |
ID | 4077375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1976745 |
End bp | 1977938 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007194 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_613873 |
Protein GI | 99081719 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.998766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACGCA GCACCCCACC GACCATCTGG ACCCTGATCC TGCTCTCCGG CCTCTCTGCC CTTGGCATGA ACATCTTTCA GCCGTCCCTG CCTGGTATGG CGGCCTATTT TGGGGTCGAG TATCGCCTGA TCGCGCTTTC GGTGCCGTTT TACCTGGCCG CAAGCACGGT GATCCAGATC GTTGTCGGGC CGATTTCGGA CAAGATGGGC CGCCGTCCGG TGATGATGGT CTCCTTGCTG CTGTTTCTGC TGGCCACGCT GGGCTGTATT TTTGCAACCA CGGCCGAGGT GTTTCTCGCT TTTCGGATGG CGCAGGCGGT GGTGGCCACC TGTATGGTAT TGAGCCGCGC CGCGGTGCGC GACATGTATG AAGGGCCCAA GGCCGCGAGC ATGATCGGCT ATGTCACCAT GGGGATGACG GTGGTACCGA TGGTGGGTCC GGCACTTGGC GGGATCTTGG ATCAGGCCTT TGGCTGGCAC GCAAACTTCT GGCTGCTCTT TGCCACCGCG GCGGTGACGC TGGTGATTTT CTACGCCGAT TTCGGCGAGA CCGCGACGGC GAGCGGCAAG CCGTTGATCG CACAGTTTCG CGAATACCCA GCACTGCTGC GCTCGCCCCG CTTCTGGGGC TACTCGCTCG CGGCGGGCCT GTCGTCAGGT AGCTTCTTTG CCTACCTCGG CGGCAGCCCT TTTGTGGGCA CCAATGTCTA TGGGCTCAAC AGTGCAGAAC TCGGGATCTA TTTCTCCGCG CCTGCGGTGG GCTATTTCCT CGGCAATTTC CTCTCCGGAC GGTACTCGGA GCGCTTTGGC ATCAACACGA TGGTGTTCTG GGGCGCGATC GTGAACATCT TTGGCGTCGG GCTTTCGCTC AGCATTACGC TTGCGGGCAT GGACACGGTG TGGACCTTCT TTGGACTGAT GTGTTTTGTC GGCCTTGGCA ACGGCATGGC GATCCCCAAT GGCACCACCG GTGCGATCAG CGTCCGCCCG CATCTGGCCG GCACAGCGGC GGGACTGTCC TCGGCGATCA TGATCGGCGC CGGTGCGGCG CTGTCGGCCA CGGCCAGCTG GCTCCTGGTG CCCGGCTCCA ATGCCGCACC TCTGCTTGAG ATCATGTTTG CCAGCGGTTG CCTTGGGTTG GTGGCCATTC TTTACGTGAT GCGGCGCGAA CGCCAGCTTG GGCTTGCGGC CTGA
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Protein sequence | MTRSTPPTIW TLILLSGLSA LGMNIFQPSL PGMAAYFGVE YRLIALSVPF YLAASTVIQI VVGPISDKMG RRPVMMVSLL LFLLATLGCI FATTAEVFLA FRMAQAVVAT CMVLSRAAVR DMYEGPKAAS MIGYVTMGMT VVPMVGPALG GILDQAFGWH ANFWLLFATA AVTLVIFYAD FGETATASGK PLIAQFREYP ALLRSPRFWG YSLAAGLSSG SFFAYLGGSP FVGTNVYGLN SAELGIYFSA PAVGYFLGNF LSGRYSERFG INTMVFWGAI VNIFGVGLSL SITLAGMDTV WTFFGLMCFV GLGNGMAIPN GTTGAISVRP HLAGTAAGLS SAIMIGAGAA LSATASWLLV PGSNAAPLLE IMFASGCLGL VAILYVMRRE RQLGLAA
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