| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1861 |
|---|
| Symbol | |
|---|
| ID | 4077886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1962303 |
|---|
| End bp | 1962836 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638007177 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_613856 |
|---|
| Protein GI | 99081702 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCC GGATCAGGGC TGCGCGTGAC GGCGACACCG AGGCGATCAC CCACCTGCAG
CGCCACATCA TCGACACCAC CCTTGCGACC TTTGCCACCG AGGGGCGCTC GCTCAGCGAT
TGGCAGGACG ACATCCTTTA TGGGGATCCG CCCATTTTGG TGGCAGAGGC TGAGGACGGG
CAATTCCTCG GCTATGCGAC CTACTCGGGC TTTCGCTCCA GCGAGGGCTA TCGCCACACG
GGCGAGCATT CGATCTATCT GACCGAGGCC GCGCGTGGAC AGGGCGTGGG GCATAAGCTG
CTCTCAGAGC TTGAAAACCG TGCCCGCGCC GCCGGTATTC ACGTCATGGT CGCCGCCATC
AGCAGCGCCA ATCCCGCCGC CGCGCGGTTT CATGCGCGCT GCGGTTACGC CGAGGTAGGG
CGGATGCCGC AGGTAGGGCG CAAATGGGAT CAATGGCTGG ATCTGATCCT GATGCAGAAA
ATTCTGCGTG AGCAGGGGAC TGCGCCGCCT GACAGCGCGC AGCGTTCCCG CTAG
|
|---|
| Protein sequence | MAPRIRAARD GDTEAITHLQ RHIIDTTLAT FATEGRSLSD WQDDILYGDP PILVAEAEDG
QFLGYATYSG FRSSEGYRHT GEHSIYLTEA ARGQGVGHKL LSELENRARA AGIHVMVAAI
SSANPAAARF HARCGYAEVG RMPQVGRKWD QWLDLILMQK ILREQGTAPP DSAQRSR
|
|---|
| |