| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1857 |
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| Symbol | |
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| ID | 4077882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1958393 |
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| End bp | 1960039 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638007173 |
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| Product | Ppx/GppA phosphatase |
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| Protein accession | YP_613852 |
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| Protein GI | 99081698 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC AGCCCGATGC CCCGCACCGC GACCTCGACA CGACGCCCCC TGTGGCGGAT
GCCCCGGAGG CCGCAGCGCC TGATGCGGCG GCAGAGGATT GGGGGCCGTT TGGTCGCCCG
CTTTTTGACG ATCCCGATGC CCGCGCCCTG AGCCGGGTGG GTGTGGTCGA TGTGGGGTCG
AACTCTGTGC GCCTGGTGGT TTTTGACGGC GCCGCCCGCA GCCCCGCCTA TTTCTACAAC
GAGAAAATCA TGTGCGGCCT GGGCGCGGGC CTCTCTGAGA CCGGCAAGCT CAACCCCAAG
GGGCGCGCGC GCGCGCTCGA GGCGCTGAAA CGGTTCCAGA TGCTGGCCAA GGGGCTCTTG
AGCGACCCGC TGACGGTGGT GGCCACCGCG GCGGTGCGCG ATGCCAGCGA CGGGCCGGAG
TTCTGCGCCG AGGTCGAGGC CGCCACGGGC CTGCGCATCC GCGTCATCAC CGGCGAGGAA
GAGGCGCGGC TCTCGGCGCA AGGCGTGCTC TTGGGCTGGC CCGGCGCCTA TGGGCTGATC
TGCGATATCG GCGGATCCTC GATGGAGCTT GCGGAAATTC AGGACGGCGA GGTCGGCCGA
TGCGTGACCT CCAATCTCGG GCCCCTGAAG CTCAAGGATA TCAAGGGCGG GCGCAAGGGA
CGCAAGGCGC ATATCGACGA GGTGATGGCC TCTTTGCGCG ACCAGTTGGG CGATCAGCGG
GATCGCCTGT TCCTCGTGGG GGGGAGCTGG CGTGCGATTG CGCGGCTCGA CATGCTGCGG
CGCAACTATC CGCTGACGGT GCAGCACGAA TACCGCATGA CCGCCAAGGA CGTGCGCGAG
ACGATCAAGT TCATCGAACA GAACGACCTT GAGAAACTGC GCTCTGACTG CGGGGTCTCC
TCGGCGCGGA TGGCGCTTGT GCCCTATGCA ATCGACGTGT TGGCGCGTCT CATCAAGACG
TTCCGCCCCA AGGACATTGC GATTTCCAGC TATGGCATCC GCGAGGGGCT TTTGTATGAG
CAGATGCCGG ATCGGCTGCG CCAACGCGAT CCGCTCATTG AAGCGGCGCG TTTTGCCGAG
GCCAAGGACG CGCGAGTTCC GGGCTTTGGG AAGACGCTCT ACACCTTTGT AAAACCGCTG
TTTTCCGGCG CGCCCTACGC CAAGATGCGG CTCGTCAAAG CGGCCTGCGT GCTGCATGAC
GTAAGCTGGC GCGCGCATCC CGATTATCGC GCGGAGGTCT GTTTTGACAA CGCCACCCGC
GCCAACCTTG GTGGGCTCAA ACATTCCGAG CGGATCTTTC TGGGGCTGGC GCTGCTGCAT
CGCTATCGCA ACAAGCGTCA GGGCACCCAT TTTGAGCATC TCTATGATCT GCTGCCGTCC
GAAAAGCAGA AAGAGGCGGA AATTCTAGGC AAGGCGATGC GCTTTGGCGC GATGCTGATG
GTGGGCGAGG ATCAGGACAT TGGCCGCCTG CGCTGGCAGC CGCGCAAACG CACGCTGCAT
GTGGAACTCC CCGCAGAGAG CGCGGCGCTC TTTGGGGAGG TGGCGCAGTC GCGGCTGATG
TCCCTCGTCA ACACACTCAA GGCCGAAGTC CGTGTGAGCG TTGCAGGCCG ACGCGGCGCG
CTGCTGGAAA AAGACGCGCG CGACTGA
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| Protein sequence | MTIQPDAPHR DLDTTPPVAD APEAAAPDAA AEDWGPFGRP LFDDPDARAL SRVGVVDVGS
NSVRLVVFDG AARSPAYFYN EKIMCGLGAG LSETGKLNPK GRARALEALK RFQMLAKGLL
SDPLTVVATA AVRDASDGPE FCAEVEAATG LRIRVITGEE EARLSAQGVL LGWPGAYGLI
CDIGGSSMEL AEIQDGEVGR CVTSNLGPLK LKDIKGGRKG RKAHIDEVMA SLRDQLGDQR
DRLFLVGGSW RAIARLDMLR RNYPLTVQHE YRMTAKDVRE TIKFIEQNDL EKLRSDCGVS
SARMALVPYA IDVLARLIKT FRPKDIAISS YGIREGLLYE QMPDRLRQRD PLIEAARFAE
AKDARVPGFG KTLYTFVKPL FSGAPYAKMR LVKAACVLHD VSWRAHPDYR AEVCFDNATR
ANLGGLKHSE RIFLGLALLH RYRNKRQGTH FEHLYDLLPS EKQKEAEILG KAMRFGAMLM
VGEDQDIGRL RWQPRKRTLH VELPAESAAL FGEVAQSRLM SLVNTLKAEV RVSVAGRRGA
LLEKDARD
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