| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1852 |
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| Symbol | |
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| ID | 4077877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1952289 |
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| End bp | 1953644 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007168 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_613847 |
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| Protein GI | 99081693 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.116732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT CTCGCTATTT TCTGCCCGTC CTCAAGGAGA CCCCCTCCGA GGCGCAGGTC
GTCAGCCACC GTTACATGCT GCGCGCCGGC ATGATCAAAC AGTCCGCCGC CGGGATCTAT
TCCTGGCTGC CTCTGGGCTA CCGCGTGCTG AAAAAGATCG AAGGCATCGT TCACGAAGAG
CAGATGCGCG CCGGTCACAT CCCGATGCTG ATGCCCACCA TCCAGTCGGC TGACCTGTGG
CGCGAGTCCG GGCGCTATGA CGCCTACGGC GAGGAGATGC TGCGCATCCG CGACCGCCAT
GACCGCGACA TGCTCTTTAC GCCAACCGCC GAGGAACTCA TCACCGACAT CTTCCGCGCC
AATGTCTCAA GCTACAAAGA CCTGCCGCTG ACGATGTATC AGATCCAGTG GAAGTTCCGC
GACGAGATCC GCCCGCGCTT TGGCGTGATG CGGGGGCGCG AATTCTACAT GAAGGACGGT
TACAACTTCG ACCTCACCAA AGAGGACGCG CTGCACGCCT ACAACCGCCA TCTGGTCACC
TACCTGCGCA CCTATGAGCG CATGGGGCTA CAGGCGATCC CGATGCGCGC CGATGGTGGC
CCGATTGGTG GCGACTACAC CCACGAATTC CTCGTGCTGG CTGAAACCGG CGAATCGGAG
GTCTTTTATG ACAGCGAGAT CACCGATCTG ACGTTCGGCG CCCGCGAGAT CGACTATGAC
AATGTTGAAC AGTGTCAGGC GGTGCTCGAA GAGTTCACCT CACGTTACGC CCGCACCGAC
GAGACCCACG ACGAGGCGCT GTTCAACGCG GTCCCAGAAG AGCGCCGCCG CGTCGCGCGC
GGGATCGAGG TCGGCCAGAT CTTCTACTTC GGCACCAAAT ACTCCGAGGC GCTGGGCGCC
ACCGTGCAGA CCGCCGATGG CCAGAGCGTG CCGGTCCACA TGGGCTCGCA CGGGATTGGT
GTGTCGCGTC TTCTCGGCGC CATCATCGAG GCCAGCCACG ACGACAAGGG CATCATCTGG
CCCGAAGGTG TGACCCCCTT CCACTGCGGC ATCGTGAACC TCAAGCAGGG CGACGATGAA
GCGGATGCCG CCTGCGAGCA GCTCTATGCG GCGCTCACCG CCATCGGTCT GGAGCCGCTT
TATGATGATC GCAAGGAACG TGCGGGCGGC AAATTCGCCA GCATGGATCT CATTGGCCTG
CCATGGCGCA TCACCGTCGG CCCGCGCGGT CTGAAGAACG GCGTCGTCGA AGTGACCAGC
CGCCGTACCG GCGAAAGCGA AGAAATGAGC CCGGAAGACG CGGTAAAGAA AATCGCCGCG
ATCTACGCCA ACCACCCCAC GCCGCGCGGC TTCTGA
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| Protein sequence | MRLSRYFLPV LKETPSEAQV VSHRYMLRAG MIKQSAAGIY SWLPLGYRVL KKIEGIVHEE
QMRAGHIPML MPTIQSADLW RESGRYDAYG EEMLRIRDRH DRDMLFTPTA EELITDIFRA
NVSSYKDLPL TMYQIQWKFR DEIRPRFGVM RGREFYMKDG YNFDLTKEDA LHAYNRHLVT
YLRTYERMGL QAIPMRADGG PIGGDYTHEF LVLAETGESE VFYDSEITDL TFGAREIDYD
NVEQCQAVLE EFTSRYARTD ETHDEALFNA VPEERRRVAR GIEVGQIFYF GTKYSEALGA
TVQTADGQSV PVHMGSHGIG VSRLLGAIIE ASHDDKGIIW PEGVTPFHCG IVNLKQGDDE
ADAACEQLYA ALTAIGLEPL YDDRKERAGG KFASMDLIGL PWRITVGPRG LKNGVVEVTS
RRTGESEEMS PEDAVKKIAA IYANHPTPRG F
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