Gene TM1040_1844 details

Gene Information

• Locus tag: TM1040_1844
• ID: 4077869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 1944980
• End bp: 1945750
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638007160
• Product: hypothetical protein
• Protein accession: YP_613839
• Protein GI: 99081685

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.103279
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.948027
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCCCTG CGCCTGCATC AAAATGCTCT CTCCTTCTCG CACGGTTTCA GCCGCGCCGC 
GTCTCAAGGG GCGCTTCATG GCTCGGACTG AGCCTCACAT TTTGCCTCCT CGCCCTACTT 
CTGTCGGCCT GTGGACGCAG CCCGACAGAG CGCGAACAGA TGTTTCTCGG CAAGATCCAC 
GGTGAGAGTC TCGACTACAG CCGCCTGCGC CTCGTCGAGG GGGCGCCCCT GCGCGCGGTG 
ACCTTTCGCC GCCCTCAGCG CCCACGCGTG ACCTGCCGCG AACGCATCCT GCCGCCGCGC 
CCGGCTGGCG AGCTGGTCAC CGCCTCTCCC GCCGCATTGG CGCTGTTCAA CCACATCTTC 
TTCACGCGGG ACTGGTTCCT CCCAGACTAC ACCCCCGAAT ACCCGGAGGC GCTCCACCTC 
GTCGAAGCAA TGCTCCTCGC GCATGAGGCC ACCCATGTCT GGCAATGGCA AAACCGCGCA 
GTTACCGGCT ATACCCCGCT CAAGGCGCTT GGCGAGCACA GCCGCTCCAG CGATCCCTAT 
CTCTTTGATC TGGACGGGCC CGCGGATTTC CTCGCCTACG GCTACGAGCA GCAAGGCACC 
ATTGTCGAAG AATACGTCTG CTGCCGCGCC CTCGCCCCTG ACGCTGCCCG CACCCAGCGC 
CTGCACGCGA TGCTCGCAAG GGTGATGCCG GTCTCTGACC TCCCGCAAAG CCGCGAAAGC 
GATGTGTATC TGCCGTGGAA AGATGCCAAA GTGGCCGGCA TCTGCGATTG A 

 

Protein sequence

MPPAPASKCS LLLARFQPRR VSRGASWLGL SLTFCLLALL LSACGRSPTE REQMFLGKIH 
GESLDYSRLR LVEGAPLRAV TFRRPQRPRV TCRERILPPR PAGELVTASP AALALFNHIF 
FTRDWFLPDY TPEYPEALHL VEAMLLAHEA THVWQWQNRA VTGYTPLKAL GEHSRSSDPY 
LFDLDGPADF LAYGYEQQGT IVEEYVCCRA LAPDAARTQR LHAMLARVMP VSDLPQSRES 
DVYLPWKDAK VAGICD