| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1840 |
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| Symbol | |
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| ID | 4077865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1941291 |
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| End bp | 1942529 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007156 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_613835 |
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| Protein GI | 99081681 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.254926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.555977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG CATCCTCTCC ACAGGTCCCG AACACCGAGG TTCCAAACGT GCACCAGGGC
GAACCGATCC CTGAGGCGGC GCGTGACGCG ATCGAGGCCT TGATGCAATC AGGCGATCTG
TTTCGCTATA CCGCGCCGCA GGATGCGCCG GTCTCGCTCC TTGAGACAGA GTTTGCCGAG
CTGTTGGGGT CGAAATATGC GCTGGCGGTG TCGTCCTGTT CGGCGGCGCT GTTCTTGTCG
CTGAAGGCGC TGGATCTGCC CCGGGATGCG CGGGTCTTGA TCCCCGGCTT TACCTTTGCG
GCGGTGCCGT CATCGGTGGT CCATGCGGAC TGTGTGCCGG TGCTTTGCGA GGTCGGAGAG
AACTACCGCA TCAACATGGC CGATTTCGAG GCCAAGCTCG ATCAGGACAT CGCGGCGGTG
ATCATCTCAC ACATGCGCGG GCACACCTCG GACATGGACG CGATCATGGC GCTCTGCGAG
GCGCGCGACA TTCCCGTAGT CGAGGATGCG GCCCATTCGC TTGGTACCAC CTGGCACGGT
CGCAACATCG GCACGATCGG CAAAGTGGGC TGTTTCTCGT TTCAGTCCTA CAAGATGCTG
AACGCCGGCG AAGGCGGGAT CCTCGTGACC AATGACGCCG ATGTGGTGGC GCGCGCGGTG
ATCATGTCCG GCGCCTACGA GCACAACTGG CAGAAACACA AACCCGCCCG TGGCGACAAT
GGCACCGCGC TGGCAGAGGC TTTTGGCCGC TGGCAGAACC TGCTGCCGCT TTATAACCTG
CGGATGAGCA ACCTTTCGGC CGCGGTCATT CGCCCCCAGA TCCCCGAGCT CGCGCGCCGG
GTCGCGGACG GGCTGAAGAA CCACGACTAT GTGGCGGCAA AACTGAATGC GCATGCCAAT
TTCCACGTCC CCGCGCCGCT GGCGCCGGAG CGGCGCGCCC CGGACTCGAT CCAGTTCAAC
CTGGTGGGCA TGGATGATGC GCAGATCGAG GCCTTTGCAA AGGCCACCGC CGACAAAGGT
GTGAAGGTTC AGATCTTTGG CCGCTCGACG GACAACGCGC GCGCGTTCTG GAACTGGCAG
TTCCTCAAGG ATCTGCCAGA GTTGCCTGAA ACCCGCGCCA TGCTGATGCG CGCCTGCGAT
GTGCGCCTGC CGGTCCGGTT GACGCAAGAC GAGTTGGACG TGATCGCCCA AATCCTGCTG
TCCTCGGTCG AGGAAACCAT GGCCCGCGCC GCCGCCTGA
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| Protein sequence | MKQASSPQVP NTEVPNVHQG EPIPEAARDA IEALMQSGDL FRYTAPQDAP VSLLETEFAE
LLGSKYALAV SSCSAALFLS LKALDLPRDA RVLIPGFTFA AVPSSVVHAD CVPVLCEVGE
NYRINMADFE AKLDQDIAAV IISHMRGHTS DMDAIMALCE ARDIPVVEDA AHSLGTTWHG
RNIGTIGKVG CFSFQSYKML NAGEGGILVT NDADVVARAV IMSGAYEHNW QKHKPARGDN
GTALAEAFGR WQNLLPLYNL RMSNLSAAVI RPQIPELARR VADGLKNHDY VAAKLNAHAN
FHVPAPLAPE RRAPDSIQFN LVGMDDAQIE AFAKATADKG VKVQIFGRST DNARAFWNWQ
FLKDLPELPE TRAMLMRACD VRLPVRLTQD ELDVIAQILL SSVEETMARA AA
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