| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1839 |
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| Symbol | |
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| ID | 4077864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1939640 |
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| End bp | 1940950 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638007155 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_613834 |
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| Protein GI | 99081680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.131772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.38658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA ACCTGCTGCA TGCAAACGAC CGACCCGGAA AATACCCCCA AAGCTGGTAC
GCCGCCACCG CAACGCCGGG GGTGCATTAC CCGTCTTTGA CGGGTGGGGT CAGGGCGGAT
GTCTGCATTG TGGGCGCGGG CTACACCGGG CTCTCGGCGG CGCTGCATCT GGCCGAGGCG
GGCCGCTCCG TAGTGCTGTT GGATGCGCAG CGTGTGGGCT TTGGGGCGTC CGGGCGCAAT
GGTGGGCAGC TCGGGTCCGG CCAGCGCCAG GACCAGGAGG TGCTGGAGAA AATGGTGGGC
GCCGAGGATG CCGCCCACCT GTGGCGCCTC GGCGAAGAGG CCAAGGACCT CGTCAAAGAC
CTGATCTCCA AGCACCAGAT CGACTGCCAC CTGAAGCCGG GCGTGGCCTG GACTGCGGAA
CGTTCGGGCG ATGTGACGCA TCTTCATGAC TACGGTCGCC ACCTTGAAGA CCGCTATGGC
TATGATCAGA TTGAGTTTCT GGATCAGGAC GCCTGCCACG CCATGTGCCC CTCCCCGGCC
TACAAGGGCG GTATTCTGGA TCATGGCGCG GGGCATCTGC ACCCGTTGAA TTTTGCGCTG
GGTCTGGCGC GGGCCGCTGC AGAGGCCGGT GCGCAGATCT ATGAGCGCAG CGAAGTCTTT
GCCATCGAGG ACGGACCGCA GGTGGAAGTG CGCACGGGCG AGGGCACCGT GCGGGCCGAT
CACGTTATAC TGGCCTGCAA CGGCTATCTC GGCGGGCTCA ACGAGCAGGT CGCCACACGC
GTGATGCCGA TCAACAATTT TGTCGCCGCC ACCGAGCCTC TGGGCGATGA CGCCGCGCAG
GTTCTGGCGC GCGATGTGGC CGTGGCGGAC AGCAAATTCG TGGTGAACTA TTTTCGCCTG
AGCCATGACA AGCGGCTGCT GTTTGGCGGC GGAGAAAGCT ATGGTTATCG CTTCCCGAGC
GACATTGCCG CCAAGGTGCG CAAACCCATG ACGGAGATCT TTCCGCATCT TCATGATGTA
AAGATCGACT ACGCCTGGGG CGGCACCCTG GGGATCACCA TGAAGCGTCT GCCCTATCTG
GCGCGGGTGT CGCCGCGGAT CCTCTCGGCC TCAGGGTATA GCGGTCATGG GGTCGGCACC
GCCACCCATG CGGGGCGGCT GCTGGCAGAG GCCATCGCAG GCCAGAGCGA GGGGTTCAAC
ACGATGGCGC GCATTCCCAC GACGCCCTTC CCGGGTGGCC CCAGGATGCG CTCTCCGCTT
CTGGTGCTGG CGATGACGTG GTTCTCCTTG CGCGACCGGT TGGGGATCTG A
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| Protein sequence | MTLNLLHAND RPGKYPQSWY AATATPGVHY PSLTGGVRAD VCIVGAGYTG LSAALHLAEA
GRSVVLLDAQ RVGFGASGRN GGQLGSGQRQ DQEVLEKMVG AEDAAHLWRL GEEAKDLVKD
LISKHQIDCH LKPGVAWTAE RSGDVTHLHD YGRHLEDRYG YDQIEFLDQD ACHAMCPSPA
YKGGILDHGA GHLHPLNFAL GLARAAAEAG AQIYERSEVF AIEDGPQVEV RTGEGTVRAD
HVILACNGYL GGLNEQVATR VMPINNFVAA TEPLGDDAAQ VLARDVAVAD SKFVVNYFRL
SHDKRLLFGG GESYGYRFPS DIAAKVRKPM TEIFPHLHDV KIDYAWGGTL GITMKRLPYL
ARVSPRILSA SGYSGHGVGT ATHAGRLLAE AIAGQSEGFN TMARIPTTPF PGGPRMRSPL
LVLAMTWFSL RDRLGI
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