Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1838 |
Symbol | |
ID | 4077863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1938162 |
End bp | 1939529 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638007154 |
Product | L-glutamine synthetase |
Protein accession | YP_613833 |
Protein GI | 99081679 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0277584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.270137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCC CGACGCGCTG GCAGGAAAAA CTGCCCGAAG CTGCCACGAC CTATCTGGAG GGCCGTCGTC TCGACGAGGT TGAATGCGTT ATCTCGGACT TGCCGGGCAT CGCCCGGGGC AAGGCGGTGC CAGCGTCGAA ATTTGCCAAG CAGGACTATT TTTACCTGCC CGACAGCATC TTTTATCAGA CCATCACCGG GGATTGGGCC GAAGCCGCCG ACGAGGACGG CTGGATCGAA AAGGACATGC TGCTGCGCCC GGACATGAGC ACCGCAACCG CCGCCCCCTG GACCGGCGAC TGGACTCTGC AGGTCATCCA CGATGCCTAT GACCGCGACG GCAACCCGAT CCCCTTCAGC CCGCGCAACG TGCTGAAACA TGTGGTGAGC CTCTATGAGG CGCAGGGCTG GAAACCCGTG GTGGCGCCGG AGATGGAATT CTATCTCGTG GCCCGCAACG TCGACCCCGC GCGCGACATC CAGCCCATGA TGGGCCGCTC TGGCCGTCCG GCGGCGGCGC GTCAGGCCTA TTCGATGACA GCGGTGGACG AATTTGGCCC CGTCATCGAC GACATCTATG ATTTTGCCGA GGCGCAAGGC TTTGAAATCG ACGGCATCAC CCAGGAAGGC GGTGCCGGGC AGCTGGAAAT CAACCTGCGC CATGGCTCGC CGGTGAAGCT AGCCGATGAG GTGTTTTACT TCAAACGCCT GATCCGCGAG GCCGCGCTGC GCCATGATTG CTTTGCCACC TTCATGGCAA AACCGATCGC TGATGAGCCG GGCTCTGCCA TGCATATCCA CCACTCGGTG ATCGACATCG AGAGCGGCGA GAACATCTTT TCCGGTCCCC AAGGTGGTGA AACGGATGCG TTTTATCACT TTATCGGCGG GCTGCAGAAC CACCTTCCTG CCGGTCTCGC GGTGATGGCG CCCTATGTGA ATTCCTATCG CCGCTATGTG AAGAACCACG CCGCGCCGAT CAATCTGGAA TGGGCGCGCG ACAACCGCAC CACCGGCATT CGGGTGCCGC TCTCCAGTTC CGCCTCGCGC CGGGTTGAAA ACCGCATCGC CGGGATGGAT TGCAACCCCT ATCTCGGTAT CGCGGTATCG CTGGCCTGCG GCTACCTCGG CCTGATGGAA GAGCGCCGCC CCACCCGCCA GTTCAAAGGC GATGCCTATG AGGGCGAAGG TGACTTTCCG CAGGTCATGG GTCAGGCGCT CGATCTCTTT GACGAGTCCA AGGCGCTTCA CGAGGTGCTC GGCCCCGAAT TCGCCCGGGT CTACAGCACG GTGAAGCGCG CAGAATACGA AGAGTTCCTG CAAGTGATCT CGCCGTGGGA GCGTGAGCAC CTGTTGCTCA ACGTCTGA
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Protein sequence | MPTPTRWQEK LPEAATTYLE GRRLDEVECV ISDLPGIARG KAVPASKFAK QDYFYLPDSI FYQTITGDWA EAADEDGWIE KDMLLRPDMS TATAAPWTGD WTLQVIHDAY DRDGNPIPFS PRNVLKHVVS LYEAQGWKPV VAPEMEFYLV ARNVDPARDI QPMMGRSGRP AAARQAYSMT AVDEFGPVID DIYDFAEAQG FEIDGITQEG GAGQLEINLR HGSPVKLADE VFYFKRLIRE AALRHDCFAT FMAKPIADEP GSAMHIHHSV IDIESGENIF SGPQGGETDA FYHFIGGLQN HLPAGLAVMA PYVNSYRRYV KNHAAPINLE WARDNRTTGI RVPLSSSASR RVENRIAGMD CNPYLGIAVS LACGYLGLME ERRPTRQFKG DAYEGEGDFP QVMGQALDLF DESKALHEVL GPEFARVYST VKRAEYEEFL QVISPWEREH LLLNV
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