| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1829 |
|---|
| Symbol | |
|---|
| ID | 4076975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 1926225 |
|---|
| End bp | 1927085 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007144 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_613824 |
|---|
| Protein GI | 99081670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.786725 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTCGTT CTGTTGCAAT CAAAGCTATC TTCTCAATCG CGGCCTTCGC CAGCAGTGTT
TCGGCGCTGG AGTTCAGGAT CACCGCATCC GGACTTGATA AAGACCGTCA CTCCTACGAG
CTCGAGCTGA TGGAGCTGGC GCTCTCCAAG GCGGATGGAG ATCATACGCT TACCCTCGTT
GACCCGGGCA ATTCCAACCA GACCCGCCTG CTGGCGCAGC TGGCTGCCGG CTCCGAGGAG
TTCGACGTCA TCTTCTCTGG CGTCAGCAAG GAACGCTACG AAAGCCTGAC GATCGTCCCG
ATCCCATTGC AGCGCGGCCT CCTTGGCCAT CGCATCCTGA TCTCGAACGA AGACAGCCTG
CCCGCATTGC AGACTGTCGA AACATTTGAG GATCTGAAGA AAATTCGCAT CGGCTCCGGC
ACCGGATGGC CGGATACCGA AATCCTCGAA AGCGCGGGTC TGAACGTCAG CGCCGCAGCC
TATGAAAACC TCTTCACCAT GACGGACAAG GGCCGGGTTC AGGGCTACGC GCGCGGCGTG
GCAGAGCCCT TTGCGGAGGT GACAAAGCGG TCCGAGAGCC ACCCGAACCT GCGCGTGGAT
AGCAGCCTGA TGATCGTCTA TCCCTTCGAT ACGTTCTTTT TTACAGGGCC CGAGGATCAG
GAACGCGCGG ACATCATTCT GCAGGGGCTG GAGCGCGCTT ATGAAGACGG CAGCTTCATG
GCGCACTTCA ACAGCCACCC CAATATCCAG TCGGTGTTTG AGCAGGCACA GATCGACAAC
CGCCTTCGCT TCGACATCCC CAATCCGCTG CTGCCCGAAG AGATCTCGAA CCTGCCGGAT
CATCTCTGGC ATGGGCGCTG A
|
|---|
| Protein sequence | MFRSVAIKAI FSIAAFASSV SALEFRITAS GLDKDRHSYE LELMELALSK ADGDHTLTLV
DPGNSNQTRL LAQLAAGSEE FDVIFSGVSK ERYESLTIVP IPLQRGLLGH RILISNEDSL
PALQTVETFE DLKKIRIGSG TGWPDTEILE SAGLNVSAAA YENLFTMTDK GRVQGYARGV
AEPFAEVTKR SESHPNLRVD SSLMIVYPFD TFFFTGPEDQ ERADIILQGL ERAYEDGSFM
AHFNSHPNIQ SVFEQAQIDN RLRFDIPNPL LPEEISNLPD HLWHGR
|
|---|
| |