| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1827 |
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| Symbol | |
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| ID | 4076973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1921801 |
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| End bp | 1923687 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007142 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_613822 |
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| Protein GI | 99081668 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.662967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.891796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTG CAACTGTGGC AGATGTCGCG GCGATCGAGC AGGAATGCAC CTGGCAGGAG
CGCGACATCC CGCGCACGCT TTATGGTCTG TTGTCACGCA CGGCGGAGCG GTTCCCGAAC
AATCCCGCCG TCAGCTACCA GATCTTTTCC GGTCCCACGG ACAAGGCGGA GACGCTGACC
TGGCGCGAGC TCAAGGCCAA GACCTGTCAG GCGGCCAACC TGTTTCGCTC GCTCGGGATC
GGAGAAAAGG ACGTGGTGGC CTATGTGCTG CCCAATTCCA ACGAGACGCT GATCACGCTG
TTGGGCGGTG CGGTGGCGGG GATCGTGAAC CCGATCAACC CGCTTCTTGA ACCCGAACAG
ATCGCGTCGA TCCTGCGCGA GACCGGCGCC AAGGTGGTGG TGACGCTCAA AGGGTTTCCC
AAGACCGACG TGCCGCAAAA AGTGGCCGAG GCGGTGGCCC ATGCGCCCAA TGTCAAAACC
GTGCTGGAGG TGGATCTCAA CCGTTATTTG ACGCCGCCGA AATCCTGGAT CGTCCCGCTC
ATTCGCCCCA AGGTGAACAA GGCCCATGCC CATGCGGACT ACAAGAATTT CAACCGCGAG
TTGGCAAAGC AGCCGACAGA GCTGGCCTTT GCCGACAGCG AAGGCGACCG GGTGGCCTGC
TATTTCCACA CCGGCGGCAC CACCGGCATG CCCAAGGTGG CGCAGCATAC CTATGAGGGG
CTGATCTACA ACGGCTGGCT CGGACATACG CTGCTGTTCT CGGAAGAGGA CAACATCATG
TGTCCGCTGC CGCTGTTCCA TGTCTTTGCC TGCCATGTGA TCGTGATGGC GGCGGTGTCC
TCTGGCGCGC ATGTGGTGTT CCCGACCCCG CAGGGCTATC GCGGCGAGGG GGTGTTCGAC
AATTTCTGGA AGCTCTGCGA GCGCTGGAAG ATCACCTTTA TCATCACTGT GCCCACGGCC
ATCTCGGCCA AGATGCAGCG CCCGGTGAAC GCTGATGTCT CGACGGTGAA GACCGCGTTT
TCGGGCTCAG CACCGCTGCC GCTCGAGCTC TTCCGGCGCT TTGAAGAAGC GACAGGCATC
ACCATTGTCG AGGGCTATGG TCTCACGGAG GCGACCTGTC TTGTGTCCTG CAACCCGGTT
GAAGGCGAAA AGAAAGTCGG CTCCATCGGC ATTCCCTTCC CCTATTGCGA TATCAAAATC
GTCAAAGGCA CACCGGAGGG GCTGCAAGAA TGTGGCGCGG ATGAGATCGG CGAGATCTGC
GTCCAGACGC CGGGCGTTTT TGCCGGCAAT ACCTATACCG AGACCGACAA GAACATCGAC
CTCTATTATC AGGACACCCA TCTGCGCACC GGCGATCTGG GGCGGGTCGA TCCCGACGGC
TATCTCTGGA TCACCGGACG GGCCAAGGAT CTGATCATTC GCGGCGGCCA CAATATCGAC
CCTGCCGACA TCGAAGAGGC GCTTCTGGGC CATGATGCGG TGGCCTTTGC CGGGGCGATC
GGCCAGCCGG ATGCGCATTC GGGCGAGCTG CCCTGCGCCT TTGTGGAACT GGTGGATGGC
GCCTCTGCCA CAGAGCAGGA GCTTTTGGAT TACTGCAAGC GCCATGTGCG CGAGCGCGCC
GCGATCCCGA AGCACATGAC CATCCTGCCG GAACTGCCCA AGACTGCTGT CGGCAAGATC
TTCAAACCGG ATCTGCGCCG CCATGCGATC ACGCGCATCT ATGACGGCGC ACTCAAGGAC
GCAGGTCTTG CGGCGCGTGT GACCTCGGTC AGCGATGACA AGAAGCGCGG TCTTGTCGCT
CAGGTCAGCC TGAACGGCAG TGACACAGCG GCGGTGGGCG AGGTGCTCTC GGTCTACACC
CGCCCGTGGG AAGAGGCCAA AGGCTGA
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| Protein sequence | MAFATVADVA AIEQECTWQE RDIPRTLYGL LSRTAERFPN NPAVSYQIFS GPTDKAETLT
WRELKAKTCQ AANLFRSLGI GEKDVVAYVL PNSNETLITL LGGAVAGIVN PINPLLEPEQ
IASILRETGA KVVVTLKGFP KTDVPQKVAE AVAHAPNVKT VLEVDLNRYL TPPKSWIVPL
IRPKVNKAHA HADYKNFNRE LAKQPTELAF ADSEGDRVAC YFHTGGTTGM PKVAQHTYEG
LIYNGWLGHT LLFSEEDNIM CPLPLFHVFA CHVIVMAAVS SGAHVVFPTP QGYRGEGVFD
NFWKLCERWK ITFIITVPTA ISAKMQRPVN ADVSTVKTAF SGSAPLPLEL FRRFEEATGI
TIVEGYGLTE ATCLVSCNPV EGEKKVGSIG IPFPYCDIKI VKGTPEGLQE CGADEIGEIC
VQTPGVFAGN TYTETDKNID LYYQDTHLRT GDLGRVDPDG YLWITGRAKD LIIRGGHNID
PADIEEALLG HDAVAFAGAI GQPDAHSGEL PCAFVELVDG ASATEQELLD YCKRHVRERA
AIPKHMTILP ELPKTAVGKI FKPDLRRHAI TRIYDGALKD AGLAARVTSV SDDKKRGLVA
QVSLNGSDTA AVGEVLSVYT RPWEEAKG
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