| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1823 |
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| Symbol | |
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| ID | 4076969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1917425 |
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| End bp | 1919062 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007138 |
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| Product | ABC transporter related |
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| Protein accession | YP_613818 |
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| Protein GI | 99081664 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0401601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.812901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CACTCCTCAA GGTCCGCGAC CTGAAAATCG GCGCCACGGT TTATCCGCCG
GGCGAGAAAC CCCATGACAT CGAAATCGTG CATGGCGTCA GCTTTGACCT CATGCCAGGC
AAGGTGCTGG GTCTCATCGG GGAATCCGGT GCAGGTAAAT CCACCATCGG TCTGTCGTCC
ATGGCCTATG GCCGGGGCGG TGTGAAAATC ACCGGTGGCG AAGTCTGGGT CAACGGGCGC
GACATCCTCA AATCCAAGCT GAGCGACATC CGCAAGCTGC GTGGGGGTGA GGTGACCTAT
GTGTCGCAAT CTGCCGCCGC GTCGTTCAAC CCGGCCAAGA CCATCATGGA ACAGGTGATC
GAAGCCTCGG TCGAGCAGGG CAAATTCTCC CGCAGAGTGG CCGAAGACCG CGCCCGCGCG
CTCTTTGCCA AGCTGGGCCT GCCCGACCCC GACAACATCG GCGCCCGCTA TCCGCATCAG
GTGTCCGGTG GTCAGCTGCA GCGCTGCATG ACCGCACTTG CGCTCTGTCC GGAACCCGAT
CTCGTGGTCT TTGACGAGCC CACCACGGCG CTTGATGTGA CCACGCAGAT CGACGTTCTG
ATGGCGATCA AGGAAGCGAT CCGCGACACC GGTGTGGCCG CGCTTTATAT CACCCACGAT
CTTGCGGTTG TGGCACAGGT CTCTGATGAC ATCATGGTGC TGCGCCACGG CAATACCGTG
GAATACGGCT CGGTCGATCA GATCATCAAC AACCCGCAAG AAGAGTACAC GCAGGCGCTG
GTCTCCGTGC GCTCGATCGA GCACGAGGAA AAGGCCCCCA CCGAGGAGCC GATCCTGTCG
GTGCGCAACA TCACTGCGCG CTACAAGGGC ACCAAGTTCG ACGTGCTGCA CAACGTGAAC
GTCGATCTCT ACCCCGGTCA GACCCTGGCC GTGGTGGGCG AGTCCGGTTC GGGCAAATCG
ACGCTGGCGC GGGTGATCAC CGGCCTTCTG CCCCCGCGCG AAGGCGAGAT CTACTTCAAC
GGGCGCACGC TCACGCCGGA CTTCAACAAC CGCAGCCGCG AGGATCTGCG CGAGTTGCAG
ATGATCTACC AGATGGCGGA TGTGGCGATG AACCCGCGTC AGACCGTAGG CACCATCATC
GGCCGGCCGC TAGAGTTCTA TTTCGGCCTG AAGGGCGCGG AAAAGCGCAA GCGGATCATC
GAGTTGCTCG ACGAGATTGA ACTCGGGGAA GGCTTTATCG ACCGCTACCC GGCAGAGCTG
TCGGGCGGGC AGAAACAGCG TGTCTGTATC GCCCGGGCGC TGGCGGCCAA GCCCAAGATG
ATCATCTGTG ACGAGGTCAC CTCGGCGCTC GATCCACTGG TGGCGGACGG CATCCTGAAA
CTGTTGCTGA ACCTGCAAAA GATCGAGGAT GTGGCGTTTC TCTTCATCAC CCACGATCTC
GCGACGGTGC GCGCGATCTC TGACAACATC GCGGTGATGT ACAAGGGCAA GGTGCAGCGC
TACGGCGGCA AGACGCAGGT GCTGAGCCCG CCCTTTGACG ACTACACCGA CCTTCTGCTG
AGCTCGGTGC CGGAGATGAA GCTCGGCTGG CTCGAAGAGG TGATCGCCAA CCGCAAGATG
GAGAGCGCGG GCAACTGA
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| Protein sequence | MSEPLLKVRD LKIGATVYPP GEKPHDIEIV HGVSFDLMPG KVLGLIGESG AGKSTIGLSS
MAYGRGGVKI TGGEVWVNGR DILKSKLSDI RKLRGGEVTY VSQSAAASFN PAKTIMEQVI
EASVEQGKFS RRVAEDRARA LFAKLGLPDP DNIGARYPHQ VSGGQLQRCM TALALCPEPD
LVVFDEPTTA LDVTTQIDVL MAIKEAIRDT GVAALYITHD LAVVAQVSDD IMVLRHGNTV
EYGSVDQIIN NPQEEYTQAL VSVRSIEHEE KAPTEEPILS VRNITARYKG TKFDVLHNVN
VDLYPGQTLA VVGESGSGKS TLARVITGLL PPREGEIYFN GRTLTPDFNN RSREDLRELQ
MIYQMADVAM NPRQTVGTII GRPLEFYFGL KGAEKRKRII ELLDEIELGE GFIDRYPAEL
SGGQKQRVCI ARALAAKPKM IICDEVTSAL DPLVADGILK LLLNLQKIED VAFLFITHDL
ATVRAISDNI AVMYKGKVQR YGGKTQVLSP PFDDYTDLLL SSVPEMKLGW LEEVIANRKM
ESAGN
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