| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1820 |
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| Symbol | |
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| ID | 4076966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1914075 |
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| End bp | 1915658 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007135 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_613815 |
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| Protein GI | 99081661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.575663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.77509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT ATCTTAAACA CCTCGCACAG GAAGCCGCAT TGGGCCGCAT GGGCCGCCGC
GAGTTCCTCG GCCGCGCTGC TGCGCTGGGT GTGACCGCAT TGGGCGCGAA CTCGCTGCTG
GCCTCTGCGG CCAAAGCGGC AGGCGCGCAA AAAGGCGGCA CCCTGCGTGT GGGTCTGCAA
GGGGGCTCCA CCACCGACAG CCTCGACCCG GCTCTGGCGA CAAACCAGGT GGCCCTCTCG
GTGATCCGTC TCTGGGGTGA GCCGCTGGTG GAACTGGGCG AAGAAGGCGG CCTCGTGGGT
GCCGTCGCCG AAAGCTTTGA AGCCTCGGCA GACGCAAAAA CCTGGACCTT CAAGCTGCGC
TCCGGCCTGA CCTTCTCCAA CGGCCAGCCG GTGACGGCGG CGGATGTTGT CGCCACCATG
GAGCGTCACT CCGGTGAGGA CACAAAATCC GGTGCGCTTG GCATCATGCG CTCCATTTCC
AACGTCAAGG CCGATGGCGA TACGGTGGTC TTTGAGCTCG AAGACGCAAA CGCCGACCTG
CCCTACCTGC TGACCGACTA CCACCTGGTG ATCCAGCCCA ACGGCGGCAA GGACGATCCG
GCGGCCGCGA TCGGCACCGG TCCTTATGTT CTGAAAGCCG TGGACATGGG CGTGCGCTTT
GTGGCCGAGA AGAACCCCAA CTACTGGGGC GATCTGGGCA ATGCGCAGAC CATCGAGTAC
GTGGTCATCA ACGACAATAC CGCCCGTGTG GCTGCACTGC AGGCCGGTCA GGTGGACATG
ATCGACCGCG TGCCGCCGCG CACCGCGAAA CTGGTGGATC GCGCGCCGAA CATCTCCGTG
CACTCCACTG CGGGTCCGGG CCACTATGTG TTCATCGCCC ATTGCGACAC CGATCCCTTT
GCCAACAACG ACGTGCGCCT CGCACTGAAA TACGGCATCA ACCGTCAGGA AATGGTCGAC
AAGATCCTGA ACGGCTTTGG CTCCGTGGGC AACGACTCGC CGATCAACGC CTCCTACCCG
CTGTTCACCC AGCTGGAGCA GCGCGAGTAC GATCCCGAGA AGGCCAAGTT CCACATGGAA
AAATCGGGCT ATGACGGTCC GATCCTGCTG CGCACCTCCG ACAACTCCTT CCCCGGAGCC
CCGGATGCGG CGGCGCTGTT CCAGCAGTCG CTGGCAGCGG CAGGCATCAA CCTCGAGATC
AAGCGTGAGC CCAACGATGG CTACTGGTCC GAGGTCTGGA ACAAGCAGCC CTTCTGCACC
TCCTACTGGG GTGGCCGTCC GACGCAGGAC TCCATGTTCT CCACCGCCTA TCTGTCGACC
GCAGACTGGA ACGACACCCG TTTCAAGAAC GAGCAGTTCG ACCAGACACT GCTGGCGGCC
CGTGGCGAGC TCGACGAAGC CAAGCGCACC CAGATGTATG CAGATATGTC GACCATGGTG
CGCGACGAAG GCGGCCTGAT CTGCCCGATG TTCAACGACT TTGTCGATGC AACGTCGGAT
CGTCTGGACG GCTGGAAAGA CGGCGTCAAA GGTCACGCTC TCATGAACGG TTACGCGCCC
CTGAAAATGT GGGTCAAAGC CTGA
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| Protein sequence | MNDYLKHLAQ EAALGRMGRR EFLGRAAALG VTALGANSLL ASAAKAAGAQ KGGTLRVGLQ
GGSTTDSLDP ALATNQVALS VIRLWGEPLV ELGEEGGLVG AVAESFEASA DAKTWTFKLR
SGLTFSNGQP VTAADVVATM ERHSGEDTKS GALGIMRSIS NVKADGDTVV FELEDANADL
PYLLTDYHLV IQPNGGKDDP AAAIGTGPYV LKAVDMGVRF VAEKNPNYWG DLGNAQTIEY
VVINDNTARV AALQAGQVDM IDRVPPRTAK LVDRAPNISV HSTAGPGHYV FIAHCDTDPF
ANNDVRLALK YGINRQEMVD KILNGFGSVG NDSPINASYP LFTQLEQREY DPEKAKFHME
KSGYDGPILL RTSDNSFPGA PDAAALFQQS LAAAGINLEI KREPNDGYWS EVWNKQPFCT
SYWGGRPTQD SMFSTAYLST ADWNDTRFKN EQFDQTLLAA RGELDEAKRT QMYADMSTMV
RDEGGLICPM FNDFVDATSD RLDGWKDGVK GHALMNGYAP LKMWVKA
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