| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1817 |
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| Symbol | |
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| ID | 4076963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1910678 |
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| End bp | 1911868 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007132 |
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| Product | hypothetical protein |
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| Protein accession | YP_613812 |
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| Protein GI | 99081658 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0944379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.317367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCATTT TTGATTTTCT CAAAGGCGAA TTCATCGACG TCATCCATTG GACCGATGAT
ACCCGCGACA CCATGGTCAT GCGTTTCGAG CGCGAGGGCC ATGCGATCAA ATACGGGGCC
AAGCTGACGG TCCGCGAGGG TCAGGCGGCC GTGTTTGTGC ATGAAGGCCA GCTGGCGGAT
GTGTTCACGC CCGGGCTTTA TATGCTTGAA ACCAACAACA TGCCGGTGCT GACCACGCTT
CAGCATTGGG ATCACGGGTT TCAGTCGCCG TTCAAATCCG AGATCTATTT TGTCGCCACC
ACGCGGTTCA ATGACCTCAA ATGGGGCACC AAGAACCCGA TCATGTGTCG CGACCCGGAG
TTCGGCCCGG TGCGCCTGCG CGCCTTTGGC ACCTATTCGG TGCGGGTGGT GGACCCGGCC
CGCTTCCTGA CGGAAATCGT CGGCACCGAT GGTGAGTTCA CCATGGATGA GATCTCTTAC
CAGATCCGCA ATATCATTGT GCAGGAGTTC TCGCGCGCGA TTGCCGCTTC TGGCATCCCG
GTGCTTGATA TGGCCGCCAA TACCGCCGAT CTGGGCAAGC TGGTCGCCGC CGAGATCGGC
CCCGTGGTGG CTGAATACGG CCTCGCGATC CCCGAGCTTT ATGTCGAGAA TATCTCCCTG
CCGCCCGCGG TCGAGCAGGC GATGGACAAG CGCACCCAGA TGGGCATCAT CGGCGATCTC
GGCCGCTATA CGCAATTCAA GGCTGCCGAA GCCATGGAAG CGGCTGCCAA AACGCCCAAC
AGCGGCATGG GCGCCGGGCT TGGGATGGGA ATGGGCATGG CAATGGCACA GCAGATGGGC
CACGCGATGC AAGGAGGCGC GACACCTCAG GCAGCGGGTC AACCGACCGG GCCATGGGGC
GCACGGCCCG CACCCGCTGC GCCGCAACCT GCGGCTCAGG CCGCACCGAT GGCACCGCCG
CCCCCGCCGG TGGAGCATGT CTGGCACATC GCGGAAAACG GTCAGACCTC GGGTCCATAC
TCCAAGGCGC GCATGGGGCG CATGGCGCAA GAAGGCCAGC TGACGCGCGA CACCCATGTA
TGGACCCCCG GTCAGGACGG CTGGATGCGC GCGGGCGATG TGACCGAGCT GGCACAGCTC
TTCACCATCC TGCCGCCGCC CCCACCGCCG CCCCCGCCCG CAGGCGGCTA A
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| Protein sequence | MGIFDFLKGE FIDVIHWTDD TRDTMVMRFE REGHAIKYGA KLTVREGQAA VFVHEGQLAD
VFTPGLYMLE TNNMPVLTTL QHWDHGFQSP FKSEIYFVAT TRFNDLKWGT KNPIMCRDPE
FGPVRLRAFG TYSVRVVDPA RFLTEIVGTD GEFTMDEISY QIRNIIVQEF SRAIAASGIP
VLDMAANTAD LGKLVAAEIG PVVAEYGLAI PELYVENISL PPAVEQAMDK RTQMGIIGDL
GRYTQFKAAE AMEAAAKTPN SGMGAGLGMG MGMAMAQQMG HAMQGGATPQ AAGQPTGPWG
ARPAPAAPQP AAQAAPMAPP PPPVEHVWHI AENGQTSGPY SKARMGRMAQ EGQLTRDTHV
WTPGQDGWMR AGDVTELAQL FTILPPPPPP PPPAGG
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