Gene TM1040_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1816 
Symbol 
ID4076962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1909253 
End bp1910500 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content62% 
IMG OID638007131 
Productcytochrome P450 
Protein accessionYP_613811 
Protein GI99081657 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.393276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.302822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCACA TTACAAAGCC CCCCTTGCCA AGACCAGAGA CCTCGGCAAA AACCGATTTT 
ATGAAAACAC TGACCCAATC CCCGACCGAC CCGGACTTTG TCCAGAACCC CTACCCGTTT
TACGACGCGG CCCGCGCGGC CGGCAAACTT GGGTATTGGG AAGAGTACAA AATGATGGCG
GCCTTTGGTC ATGACGTGGT GCACATGCTG CTGCGCGACC GCCGCTTTGG GCGCGAAATC
CCCGCCGAGA TGGCCACCGA AGGCCCGGCG CATCTGGCGC CCTTCCTGCA AGTAGAGGCA
CATTCGCTTC TGGATGCGGA ACCGCCCCGC CATACGCGGC TGCGCAAACT GGTGCTGCGC
GCCTTCACCA GCCGCGAGAT AAAGGCGCTT GCGCCGGGGC TAGAGACGCT CTGCCACGAA
TTGATCAATG CGTTCCCCAA GGATGCGCCC TTTGATCTGC TCAGCAGCTA TTGCACGCAG
GTGCCGGTGA TCGCGATCTG TCGCCTGCTG GGCGTACCCG AGGCCATGGC GCCGCAACTT
CTCGACTGGT CGCACAAGAT GGTGGCGATG TATCAGGCCT CCAAGACCAC CGAGACCGAA
CATGCCGCAG CACAGGCCAG CGCCGAGTTC ATCGCCTTTT TGACCGACTA CGTAGACGAG
CGCCGCAAGA CCCCGGGCGA GGATCTCATC ACCCGGCTCA TTCAGGCCGA GGAAGATGGC
GAAAGCCTCT CGACGGACGA GCTCATCGGC ACCTGCATCC TGCTCCTAAA TGCTGGTCAC
GAGGCCACGG TGCATTCGCT CGGCAACGGG GTGAAAACCA TGCTCGAACA GGGCTGGTCT
TCCGAGTGGC TTCAGCCCGA TGGCATCAGC GGGCTCGTCG AGGAAATCCT GCGCTATGAC
CCACCGCTCC ATATGTTCAC ACGCTACGCC TATGAGGAGA TCGAGATCAT GGGCCACCGT
TTCCGGCGGG GCGATCAGGT GGCTCTGATG CTGGCGGCTG CCAACCGAGA TCCGGAGGCG
CTGGAGCGCG CCGATCAGTT TGATCCCACG CGCCCGCCCA AGGTGAACAA GAGCTTTGGC
GGCGGGCTGC ATTTCTGTGT CGGCGCACCG CTTGCGCGGA TGGAGATGGA GATCGCGCTG
CCGATCCTTT TTGAGCGCTG CCCGGAGTTG AAACTGGCCG AGCCGCCCCA GTATTCCAAC
ACCTACCATT TCCATGGGCT GACCCGGCTT TGGGTGCAAA CCCGCTAA
 
Protein sequence
MRHITKPPLP RPETSAKTDF MKTLTQSPTD PDFVQNPYPF YDAARAAGKL GYWEEYKMMA 
AFGHDVVHML LRDRRFGREI PAEMATEGPA HLAPFLQVEA HSLLDAEPPR HTRLRKLVLR
AFTSREIKAL APGLETLCHE LINAFPKDAP FDLLSSYCTQ VPVIAICRLL GVPEAMAPQL
LDWSHKMVAM YQASKTTETE HAAAQASAEF IAFLTDYVDE RRKTPGEDLI TRLIQAEEDG
ESLSTDELIG TCILLLNAGH EATVHSLGNG VKTMLEQGWS SEWLQPDGIS GLVEEILRYD
PPLHMFTRYA YEEIEIMGHR FRRGDQVALM LAAANRDPEA LERADQFDPT RPPKVNKSFG
GGLHFCVGAP LARMEMEIAL PILFERCPEL KLAEPPQYSN TYHFHGLTRL WVQTR