| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1814 |
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| Symbol | |
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| ID | 4076960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1906276 |
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| End bp | 1907505 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638007129 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_613809 |
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| Protein GI | 99081655 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.174742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA AGGTGCTGTT GGTTGATGAT GATGCGGCCG TTCGCGAGGC GCTGGGCCAG
ACGCTCGAGC TTGCCGATCT CAACGCGGTG ACGGCGGGGT CGTTTGTGGC CGCAAAGGAC
CACATCACCC CGGATTTCGA GGGGGTGATC CTGTCGGATA TGCGGATGCC GGGGCGTGAT
GGGTTCCATC TGTTGTCCTA CGCACAAGAG GTGGATGCGG AGCTGCCGGT GGTGCTGCTG
ACGGGCGAGG GCGACATTCC CATGGCGGTG CGGGCGATGT CCGAGGGGGC TTTTGATTTT
CTCGAAAAAC CCTGCGAGGC GGCCACGCTG ATGACGGTGC TGGAACGTGC GCTGAAGACG
CGCGCGCTTG TGCTGGAAAA CCGCCGCCTG CAACGCCAGC TGGAGCGGGG GGACCCGGCG
GCGCGGATGA TCTTTGGCGT CTCGCCCCAG ATCCAGGAGC TGCGCGCGCG GGTGCGGGCT
GCGGCGGCGA CCGACGCCGA AGTGCTGGTG AGTGGCGCGC CCGGCAGTGG CATTCCCAAG
ATCGCCGAGG TCGTGCATCT GATGTCGCGG CGCGGGCAGG GGGCGTTTGT CAAACGTCCG
GCGGCGGGGC TGACCCCTCA GACCTTCGAG GAGCTTTGCC AGACCGCCGA GGGCGGATCC
CTGTTCCTCG ATGAGCTGTC GGCCATGCCG CAAGAGACGC AATATGCGGT GCTTGCGCGG
CTCGAGCAGG GGGGCGGTGC GCGCATCATC GGCGGTTCGA CCGTGGATCT GTCGGAACGT
GTGGCGGGCG GCAGTTTCAA CGCCGAGCTT TACTATCGCC TCGACGTGAT GCGGGTGCGG
GTGCCCTCGC TTGCCGAGCG GCGCGAGGAT ATTCCGGTGC TCTTTCGCCA TTATGTGAGC
CAGGCCGCCG AGCAGGCGGG GATCGACGCC CCGGAGATCA GCCCCGATAC GCTGGCAAGC
CTGATGGCGC AGGACTGGCC CGGAAATGCG CGCTCCTTGA TGTCGGCGGC GATGCGCTTT
GTGCTTGGCA TGCCCGAAGA AGTCGCGCAG GCGACCGATC TGGGGCTCGC GGAACAGATG
GCGCAGGTCG AGCGCTCGCT GCTGATTGCG GCCCTCGGGC GGCAGAACGG CAAGGCGGCA
GCCGCCGCCG AAGCGCTGAA ACTGCCGCGC AAGACCTTCT ATGACAAGCT GGCCCGCTAT
GGGATTCGCC CCGAGGACTA TCGGCGCTAA
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| Protein sequence | MTRKVLLVDD DAAVREALGQ TLELADLNAV TAGSFVAAKD HITPDFEGVI LSDMRMPGRD
GFHLLSYAQE VDAELPVVLL TGEGDIPMAV RAMSEGAFDF LEKPCEAATL MTVLERALKT
RALVLENRRL QRQLERGDPA ARMIFGVSPQ IQELRARVRA AAATDAEVLV SGAPGSGIPK
IAEVVHLMSR RGQGAFVKRP AAGLTPQTFE ELCQTAEGGS LFLDELSAMP QETQYAVLAR
LEQGGGARII GGSTVDLSER VAGGSFNAEL YYRLDVMRVR VPSLAERRED IPVLFRHYVS
QAAEQAGIDA PEISPDTLAS LMAQDWPGNA RSLMSAAMRF VLGMPEEVAQ ATDLGLAEQM
AQVERSLLIA ALGRQNGKAA AAAEALKLPR KTFYDKLARY GIRPEDYRR
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