| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1808 |
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| Symbol | |
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| ID | 4076954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1899560 |
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| End bp | 1900498 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007123 |
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| Product | hypothetical protein |
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| Protein accession | YP_613803 |
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| Protein GI | 99081649 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0443573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAA AATGGGGGCT TGTCGCCACG CTCAAAGCCG AGGCTGAGGC TGTTTTGAAC
TTTGCTGCTT GGCATCTGGA GCAGGGCGCG CATCGCCTGT TTCTCTATCT GGACGCAGCC
TGTCCTGACG CACTGCCGCA TCTTCAGGAT CACCCCCGTA TTCGCGTGAT CGAGACGACC
GAGGCCCATT GGCTTAAGCG TCGCGGGCGC GTTCCGGAAA AACATCAGGT TCGCCAGAGC
CTCAACGCGA CCCGCGCCTA TCGACGACAA GCGCGCGATC TGGACTGGCT CATCCATATC
GATGTGGACG AGTTCCTCTG GTCCCCCGAT CCGCTGGCGC CACAGCTGGA AGCACTCGAC
CCAGACGTCC TGTGCGCGCG CGTACGCCCG CTTGAACATC TTGCCGGTAG CGCCGACCGG
TTCAAATCCC GCATCCCTTC CGGGTCAGAT GCCTCTCAGA TCAGCACCCG TATCTATCCG
CGCTTTGGCG GCTACCTCAA AGGCGGATTT GTCAGCCATG TGCAGGGCAA GCTCTTTGTA
CGCACGGGTC TAGAAGAGGT GGATCTGCGC ATCCACAATG TGTTTGTCGA AGGCGTTGAA
AACCCCTGCG CCACTGAACT TACAAACATC GACCTCTGCC ACCATCACGC AAGCGACTGG
GCGCAGTGGA TCGCACAATA TCGTTACCGC CTGAACAAGG GCTCCTATCG GGCCGATCTG
CGCCCCGCGC AGCCCCGCAG CGCAGGCGGC ACCACCCTGC ACGAGCTGCT TTCGCTGCTC
GAGGCGGAAG AGGGCGAATC CGGCCTCAGG GCGTTTTTTG ACGAGACCTG CGCCGACAGC
CCCGAACTCC GCCAAACGCT TGCCTCAGAG GGGCTTTTGC GTCAACGCGC CCTGCCCCTG
GTCGCAATTC GTCAGAAACA CTTCCCGCAT TTTTCGTAA
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| Protein sequence | MTVKWGLVAT LKAEAEAVLN FAAWHLEQGA HRLFLYLDAA CPDALPHLQD HPRIRVIETT
EAHWLKRRGR VPEKHQVRQS LNATRAYRRQ ARDLDWLIHI DVDEFLWSPD PLAPQLEALD
PDVLCARVRP LEHLAGSADR FKSRIPSGSD ASQISTRIYP RFGGYLKGGF VSHVQGKLFV
RTGLEEVDLR IHNVFVEGVE NPCATELTNI DLCHHHASDW AQWIAQYRYR LNKGSYRADL
RPAQPRSAGG TTLHELLSLL EAEEGESGLR AFFDETCADS PELRQTLASE GLLRQRALPL
VAIRQKHFPH FS
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