| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1807 |
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| Symbol | |
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| ID | 4076953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1897799 |
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| End bp | 1899487 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007122 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_613802 |
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| Protein GI | 99081648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0541486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCAG TGAAACACAT CGCACCCGTT CAGCACGGCT TTTCCTTGCC TCTGAGCCGC
TTTGTGGCTA AGGCCAGCCT CATGTTGGAC ACCGCTCATA ACCGCCCCGA TCTGCCGCCG
GAAATCGCGC GGCGCCGCAC CTTTGCGATC ATCTCGCACC CGGATGCGGG CAAGACCACT
CTGACCGAGA AGTTCCTCCT TTATGGGGGC GCCATCCAGA TGGCGGGTCA GGTGCGCGCC
AAGGGCGAAG CGCGGCGCAC GCGTTCTGAC TTCATGCAGA TGGAAAAGGA TCGGGGCATC
TCGGTTTCGG CCTCCGCAAT GTCCTTTGAC TACGGGGATT TCCGCTACAA CCTCGTCGAC
ACGCCCGGCC ACTCGGACTT TTCCGAGGAC ACCTACCGCA CGCTGACGGC GGTGGACGCG
GCGGTGATGG TGATTGATGG CGCCAAGGGT GTGGAAAGCC AGACCCAGAA GCTCTTTGAA
GTTTGCCGCC TGCGCGATCT GCCGATCCTG ACCTTCTGTA ACAAGATGGA CCGCGAGAGC
CGCGATACCT TCGACATTAT CGACGAGATT CAGGAAAACC TCGCCATCGA CGTCACCCCG
GCGAGCTGGC CTATCGGCGT CGGGCGTGAC TTTATCGGCT GTTATGACCT CTTGCGCGAC
CGGCTCGAAC TGATGGATCG TGCTGACCGC AACAAGGTGG CAGAGAGCAT CTCGATCAAC
GGGCTTGATG ATCCCAAACT GGCCGAGCAC GTCCCGGAGC ATCTGTTGGA AAAGCTGCTC
GAAGAGGTCG AAATGGCGCG CGAGCTTTTG CCGACGCTGG ACCCGCAAGC GGTGCTCGAG
GGGCATATGA CCCCGATCTG GTTCGGCTCT GCGATCAACT CCTTTGGGGT GCGCGAGCTG
ATGGACGGGA TCGGCCAATA CGGCCCTGTG CCTCAGATCC AATCCGCCGA ACCCCGCCAG
ATCGCGCCCG AAGAGAAAAA AGTCGCAGGC TTTGTCTTTA AGGTGCAGGC CAATATGGAC
CCAAAGCACC GCGACCGCGT CGCCTTTGTG CGTCTGGCGT CGGGCCACTT CAAACGTGGC
ATGAAGCTGA CGCATGTGCG CAGCAAGAAA CCGATGGCGA TCTCCAACCC GGTGCTGTTC
CTCGCCTCTG ACCGCGAGCT TGCAGAAGAG GCCTGGGGCG GCGACATCAT CGGCATTCCC
AACCACGGCC AGCTGCGCAT TGGCGACACG CTCACCGAAG GCGAGGCGCT GCGCGTCACC
GGCATCCCCT CATTCGCACC GGAGCTGTTG CAAGGCGTGC GTGCGGGCGA CCCGATGAAG
GCCAAGCACC TTGAAAAAGC CCTGATGCAA TTTGCCGAAG AAGGCGCCGC AAAGGTCTTC
AAACCTTCGA TCGGCTCGGG CTTTATCGTC GGTGTTGTCG GCGCGCTGCA ATTTGAGGTG
CTCGCCAGCC GCATCGAAAT GGAATACGGC CTTCCCGTGC GCTTTGAGGC ATCGCAGTTC
ACCTCCGCAC GCTGGGTGCA TGGGGACAAG ACGGCAGTGG ACAAATTCGT CAACGCCAAC
AAGCAGCACA TCGCCCATGA CAACGATGGC GACATCGTCT ACCTCACGCG GCTGCAATGG
GACATCGACC GGGTAGAGCG GGATTATCCC GACTTGAAAC TCTCCTCCAC CAAGGAGATG
ATGGTCTAA
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| Protein sequence | MRPVKHIAPV QHGFSLPLSR FVAKASLMLD TAHNRPDLPP EIARRRTFAI ISHPDAGKTT
LTEKFLLYGG AIQMAGQVRA KGEARRTRSD FMQMEKDRGI SVSASAMSFD YGDFRYNLVD
TPGHSDFSED TYRTLTAVDA AVMVIDGAKG VESQTQKLFE VCRLRDLPIL TFCNKMDRES
RDTFDIIDEI QENLAIDVTP ASWPIGVGRD FIGCYDLLRD RLELMDRADR NKVAESISIN
GLDDPKLAEH VPEHLLEKLL EEVEMARELL PTLDPQAVLE GHMTPIWFGS AINSFGVREL
MDGIGQYGPV PQIQSAEPRQ IAPEEKKVAG FVFKVQANMD PKHRDRVAFV RLASGHFKRG
MKLTHVRSKK PMAISNPVLF LASDRELAEE AWGGDIIGIP NHGQLRIGDT LTEGEALRVT
GIPSFAPELL QGVRAGDPMK AKHLEKALMQ FAEEGAAKVF KPSIGSGFIV GVVGALQFEV
LASRIEMEYG LPVRFEASQF TSARWVHGDK TAVDKFVNAN KQHIAHDNDG DIVYLTRLQW
DIDRVERDYP DLKLSSTKEM MV
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